KEGG   Commensalibacter melissae ESL0284: GN303_08390
Entry
GN303_08390       CDS       T06375                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
comm  Commensalibacter melissae ESL0284
Pathway
comm00521  Streptomycin biosynthesis
comm00523  Polyketide sugar unit biosynthesis
comm00525  Acarbose and validamycin biosynthesis
comm00541  O-Antigen nucleotide sugar biosynthesis
comm01100  Metabolic pathways
comm01110  Biosynthesis of secondary metabolites
comm01250  Biosynthesis of nucleotide sugars
Module
comm_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:comm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    GN303_08390 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    GN303_08390 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    GN303_08390 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    GN303_08390 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    GN303_08390 (rfbB)
Enzymes [BR:comm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     GN303_08390 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short Sacchrp_dh_NADP KR Gp_dh_N
Other DBs
NCBI-ProteinID: QGT69262
Position
complement(1878651..1879706)
AA seq 351 aa
MLILVTGGCGFIGSAVIRHLIKNTQHEVVNIDILTYSASFENVAEIAGNSRYSFCKTDIT
DFISLKKIFNQFKPDAVMHLAAESHVDRSIDGPEVFIRTNIHGTYCLLQAAYEYWRAMSV
DRQRKFRFHHISTDEVFGALQSDDPPFTEQTPYDPRSPYSASKAASDHLVRAWFHTYGLP
TFVTNTTNNYGIWHFPEKLIPLMIINALEGKALPVYGKGDNIRDWLYVEDHAEALVKAIE
LGIPGETYAIGAQQPRTNLEVVQTICHILDELKPDPQGKYERLIHFVTDRPGHDFRYEIN
PVHAQTELKWKAKHNFEEGIRKTIQWYLNHEDWWKNIRQKHYAGQRLGIKQ
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgttgattttagtcactggaggatgtggttttattggttcagctgtgattcgacatctt
ataaaaaatacgcagcatgaagtggttaatatcgatatcctaacgtattcggcttctttt
gaaaatgtggcagaaatagctggaaatagccggtattctttttgcaaaactgatattact
gattttatttcattaaaaaaaatatttaatcaattcaaacctgatgcagtaatgcacctg
gctgcagaatctcatgtagatcgttcgattgatgggcctgaagtgtttattcggaccaat
attcatggaacatattgtttattacaggctgcttatgaatattggagagcaatgtcagta
gatagacaaagaaaattccgtttccatcatatttcaacagatgaagtttttggtgcttta
cagtctgatgatcccccatttacagaacaaaccccttatgatccacgcagtccttattct
gcttcaaaagcagcttcagatcatctggttagggcttggtttcatacatatggacttcca
acttttgtgacaaacacaacaaataattatggcatttggcattttccagaaaagttaatc
ccgttaatgattatcaatgccttggaaggcaaggctctaccagtttatggtaagggagac
aatataagagactggctgtatgttgaggatcatgctgaagcgcttgtaaaagctatagag
cttggaattccgggagaaacttatgcaattggtgcccaacaacccagaactaatctggag
gttgtgcaaacgatttgtcatattcttgatgagctgaagcctgatcctcagggaaaatat
gagcggttgattcattttgtgacggatcgtccaggtcatgattttagatatgaaataaat
ccagtccatgcacaaaccgaattaaaatggaaagcaaaacacaattttgaagaaggaatt
cgtaaaacgattcaatggtatttgaatcatgaggattggtggaaaaatattcgtcaaaaa
cattatgctggacaacggttgggaataaaacaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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