KEGG   Actibacterium sp. EMB200-NS6: TQ29_01245
Entry
TQ29_01245        CDS       T04096                                 
Name
(GenBank) peptide ABC transpoter substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
con  Actibacterium sp. EMB200-NS6
Pathway
con02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:con00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TQ29_01245
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:con02000]
    TQ29_01245
Transporters [BR:con02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    TQ29_01245
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ALG89037
Position
263435..265009
AA seq 524 aa
MLKQLLKGVAAAALSLAVSAGAHAQEDTRPDLTVAVNNLPDSLEGIEEMGNVAVRITYSM
FDSLIRRDFLADGSGTASKLVPGLAESWTRIDDRTLELKLREGVTFHDGSELTSDDIVFS
FNPGRGHGYAPLIGAARRFMLTISHVEPVDKYTVRIVSKEPDVLLEQRLAGYAFWVVNAK
NYLTVGKDAFARKPIGTGPYKMDEWVDGEYIRLVSHDDYFGGKPTAKSVTFVEVPETSAR
IAGLVSGEYDISVNIPPDQIATIESYDDLKVEQIVLDNTHMLVFFTKGPLEDKRVRQALS
LAINRPLLREALWDNKNYTPNGHQLPAYTMWIKDYPEFAYDPEKAKALLKEAGYDGEEII
YKLPMNYYLLSMEAAQAMQQMWKEVGLNVTLQPVENWSQVTDADQPVHIRPWSNTHRMPD
PLGSFVPQWGKDSGIQKNKQDADRAWDAPARFNELQDVMVSSTDWDVRKQAYRDALDIWM
DEAPGTMLYNPLETYAMRKDIGWKPYGLYYMDLRPYNLQFGAGN
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgctgaaacaactgctcaagggcgttgcagccgctgcgctgtcgctggccgtgtcggcc
ggcgcccacgcccaggaagacacgaggcccgatctgaccgtggccgtgaacaacctgccc
gacagcctcgaagggatcgaggagatgggcaatgtggccgtgcgcatcacctattcgatg
ttcgacagcctgatccgccgggatttcctggccgacggctccggcacggcctccaagctg
gtgccgggcttggccgaaagctggacgcgcatcgacgaccgcacgctggaactcaaactg
cgcgaaggcgtgacctttcacgatggctccgagctgacatcggacgacatcgtgttttcg
ttcaacccgggccgcggccacggctatgccccgctgatcggcgcggcgcgccgcttcatg
ctgaccatcagccatgtagagccggtagacaaatacaccgtgcgcatcgtgtcgaaagag
cccgacgtgctgctggaacagcggctggccggctacgcgttctgggtggtaaacgccaag
aactacctgaccgtcggcaaggatgccttcgcgcgcaagccgatcggcacgggcccgtat
aaaatggacgaatgggttgacggagaatacatccgcctcgtctcgcatgacgattacttc
ggcggcaagccgaccgccaaatcggtgacattcgtcgaggtgccggaaacctctgcccgg
atcgcggggctggtgtcgggcgaatatgacatttcggtcaacatcccgccggatcagatc
gcgacgattgaaagctatgacgatctgaaggtcgagcagatcgtgctggacaacacccat
atgctggtcttcttcaccaagggcccgctggaagacaagcgcgtgcgccaggcgctttcg
ctggccatcaaccgcccgctgctgcgcgaggcgctgtgggacaacaagaactacacgccc
aacggccatcagcttccggcctatacgatgtggatcaaggattatcccgaattcgcctat
gatccggaaaaggccaaggccctgctgaaggaagccgggtatgacggcgaagagatcatc
tacaagctgccgatgaactattacctgctgtcgatggaagcggcgcaggcgatgcagcag
atgtggaaagaggtcggcctgaacgtgaccctgcagccggtggaaaactggagccaggtg
accgatgccgatcagccggtgcatatccgcccctggtccaacacccaccgcatgcccgac
ccgctgggttctttcgtgccgcaatggggcaaggacagcggtatccagaagaacaagcag
gatgccgaccgcgcctgggacgcgccggcccggttcaacgagctgcaggacgtgatggta
tcctcgaccgactgggacgtgcgcaagcaggcctatcgcgacgcgctggacatctggatg
gatgaggcgccgggcaccatgctttacaacccgctggagacctatgcgatgcgcaaggac
atcgggtggaagccttacggcctctactacatggatctgcgcccgtacaaccttcagttc
ggcgcagggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system