KEGG   Actibacterium sp. EMB200-NS6: TQ29_06955
Entry
TQ29_06955        CDS       T04096                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
con  Actibacterium sp. EMB200-NS6
Pathway
con02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:con00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TQ29_06955
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:con02000]
    TQ29_06955
Transporters [BR:con02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    TQ29_06955
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ALG89980
Position
complement(1413590..1415230)
AA seq 546 aa
MIRLNRRHALGLMGATAGSLLLPGYLRAQGTRPSVTIAVQKITNNNTLDPWNEQSNVGER
VLYPNLWEGLILRDWMGDQGPVPGLATEWKRIDEQTLELKLRPGVKFHNGDEMTAEDVAF
SFSKERVFGDTEPAGGKTIFAENFKPETAKDIPANVPGIGRRKWPSLAGVEVIDKYTVRF
HNATPDVTLEGRLYAGGSQILNRRAWDEAATYSDWAAKPITTGPYMVGEYRPDVSLTLVA
FDDYWGGRPPLESITFVEVPEVASRVNGLLSGEYDFACDLPPDQIGTVMNVDGFEVQNST
IWNHRISVFNTENEILADPLVRRAMTHAIDREAIVQALWGGMTNVPAGLQFESFRSSDMF
IEGWKVPEYNPTLARDLLKQAGYKGDAIPYRLLNNYYTNQTANGQIMVEMWKQVGLNVEI
EMKENWGQIHDPAGIKGVRDWSASNTINDPITPMVVQFGPNGEVQQKKDWSNAELNDLSV
VMETSTDRGLRKKAIARMLEIAEREDPAYQLLHQNAVFTGMRSDLGWKAAPAFAMDFRAS
NWPSNG
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgatcagacttaatcgacgccatgcgcttggcctgatgggcgccaccgccggcagcctc
ctgctgcccggctatcttcgcgcgcagggcacccgcccctctgtgacgatcgcggtgcag
aaaatcaccaacaacaacacgctcgatccgtggaacgaacagtccaacgtcggggagcgc
gtgctctatccgaacctctgggaaggcctgatcttgcgcgactggatgggtgaccagggg
ccggtgccgggcctcgccaccgagtggaaacgtattgatgaacagacgctcgagctgaag
ctccgcccgggcgtcaagtttcacaacggtgacgagatgacggccgaagacgtggcgttc
tcgttctcgaaggaacgggtgttcggcgataccgagccggccggtgggaaaacgatcttt
gccgagaatttcaaacccgaaacagccaaggatatcccggcgaacgtacccggcattggc
cgccgcaaatggccctcgctggccggtgtcgaagtgatcgacaaatacaccgtccggttt
cacaacgccacgccggacgtcaccctcgaaggccgcctttatgctggcggcagccagatt
ctgaaccggcgcgcctgggacgaagccgccacctattccgattgggccgccaagccgatc
accaccggcccctacatggttggcgagtatcgccccgacgtttccctgacgcttgtggct
ttcgatgattactggggcgggcgtccgccgcttgaaagcatcaccttcgtagaggtgccc
gaagtggccagccgtgtgaacgggcttttgtccggcgaatacgattttgcctgtgacctg
cccccggatcagattggcaccgtgatgaacgtcgatggctttgaggtccaaaactcgacc
atctggaaccaccgcatttcggtttttaacactgaaaacgaaattctggccgatccgttg
gtgcgtcgcgcgatgacacatgcgattgaccgcgaggcaatcgttcaggcgctttggggt
ggcatgaccaacgtccccgccggtcttcagttcgagagttttcggagctcggacatgttc
atcgagggctggaaggttcctgaatacaatccgacgctggcgcgggatctgctgaagcag
gccggctacaagggagacgcgatcccctaccgcctgctcaacaactactacaccaaccag
actgcgaatggtcagatcatggttgagatgtggaaacaggttggcctgaacgtcgagatc
gaaatgaaagagaactggggccagatccacgatccggcaggcatcaagggcgtgcgcgac
tggtccgcgtcgaacactatcaacgatccgatcacgccgatggtggtacagttcggtccg
aacggtgaggtccagcagaaaaaagactggtccaacgcagagctcaatgatctctcggtg
gtcatggaaacctcaactgaccgcggcctgcgcaaaaaggccattgcccggatgctggaa
atcgccgaacgcgaagacccggcctatcagctcctgcatcagaacgcggtcttcaccggc
atgcgctcggatctgggctggaaagccgctcctgcctttgcgatggacttccgcgcctcg
aactggccgtcgaacggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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