KEGG T04096: TQ29

Actibacterium sp. EMB200-NS6: TQ29_16930

Entry

TQ29_16930        CDS       T04096

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

con Actibacterium sp. EMB200-NS6

Pathway

con03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:con00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TQ29_16930
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:con03400]
    TQ29_16930
Enzymes [BR:con01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     TQ29_16930
DNA repair and recombination proteins [BR:con03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     TQ29_16930

SSDB

Motif

Pfam:

Exo_endo_phos DUF2755

Other DBs

NCBI-ProteinID:

ALG91567

Position

complement(3477334..3478122)

AA seq 262 aa
MPFTVATWNINSVRLREPIVLKLLAEEAPDVLCLQECKSPVDKIPLEGFRALGYGHVVAR
GQKGYNGVAILSKLPIADVGEMDFAGLGHARHVAARLENGVTIHNFYVPAGGDVPDRMVN
EKFGQKLDYLTEMRDWFHGDAPEKSILVGDLNIAPREDDVWNHKQLLKIVSHTPIEVEHL
GQAQEAGRWVDVTRADIPQGLLYSWWSYRARDWDAADKGRRLDHIWATPDISNAAHGSRI
LRAARGWEKPSDHAPVFASFDL

NT seq 789 nt +upstreamnt +downstreamnt
atgcccttcaccgtcgccacctggaacatcaactccgtccggctgcgcgagccaatcgtg
ctgaagctgctggccgaggaagcgccggatgtgctgtgcctgcaggaatgcaagagcccg
gtcgacaagatcccgctggaggggttccgggcactgggctacggccatgtggtggcgcgg
gggcagaagggctataacggggtggcgatcctgtcgaagctgcccatcgccgatgtcgga
gagatggatttcgccgggctgggccacgcgcggcatgtggctgcgaggctggaaaacggc
gtgaccatccacaatttctacgtgcccgccggcggcgatgtgccggatcgcatggtgaat
gagaaatttggccagaagctggattacctgactgaaatgcgcgactggtttcatggcgac
gcgcccgagaaatcgattctggtgggcgatctgaacatcgccccgcgcgaggatgacgtc
tggaaccacaagcagttgctgaagatcgtcagccataccccgatcgaggtggagcatctg
ggccaggcgcaggaggcgggcagatgggtggatgtcacgcgggccgatattccccagggg
ctgctttacagctggtggtcctatcgcgcgagggattgggacgccgcggacaagggccgc
aggctcgatcacatctgggccacgccggatatctcgaacgccgcgcatggctcgcgcatt
ctgcgcgcggcacggggctgggaaaagccgagcgaccatgcgccggtctttgcgagcttc
gatctgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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