KEGG   Caldicellulosiruptor owensensis: Calow_0854
Entry
Calow_0854        CDS       T01347                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
cow  Caldicellulosiruptor owensensis
Pathway
cow03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Calow_0854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cow03400]
    Calow_0854
Enzymes [BR:cow01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Calow_0854
DNA repair and recombination proteins [BR:cow03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Calow_0854
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C Helicase_C PriA_CRR ATPase_2 PIF1 AAA_19 AAA_16 IstB_IS21 T2SSE Glycos_transf_2 Fe_hyd_SSU Helicase_C_2 AAA_22 AAA_30 UPF0547 TK
Other DBs
NCBI-ProteinID: ADQ04422
UniProt: E4Q6C3
Position
941284..943458
AA seq 724 aa
MIAQVCINYQDANVDKVFDYLVPTHFENSIEIGKRVYVNFGVSNRIVEGLVVGIKQTTDI
EENKLKSVLAVIDKFSIVSKEQIELALSMKNYYALNLGEALSLVIPPFVSSKQIYNICAK
KHEENSNMDDDLKKLYESILKKPVSINSKLVKENKEKIIKLFLKGLLEFDLKNFAIKEDS
EKNLPLVEPNYNLTEEQNKALNSIISAFDEGGYRNILLFGVTGSGKTEVYIRAIQYAIEK
GKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSIDRLNSWLAARNKEAVVVIGPR
SAVFAPVKNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPIILGSATPSIEHY
FYAQKGRYFLCTLKNRINKNLPEVLIVDMKKEILEGNKSIFSRLLLSEIENNLKKGEQVL
LFLNRRGYSPIVICRECGYVFMCKNCSISLTYHKEGYLRCHYCGYKEEYRGVCAKCNSKY
VRQYGSGTQKIEEEIKAYFKDARVLRMDSDTTSKKDATEQIVKKFREKEADILIGTQMIA
KGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGREKPGRVIIQTFNPEDY
SIVFASKHDYESFYAQEIKLRKMMEYPPYSYVVNFIVVASEQNLAKKGIEHVYTILKDFE
NETDMKVYGPSENPIFKIENQYRYHILVKFKRAGQMISIANLIKERYNYNNASLIIDVNP
LDTL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgatagctcaggtttgtatcaactaccaggacgctaatgttgataaggtgtttgattat
ttggtaccaacacattttgaaaatagcattgagatagggaagagagtgtatgtcaacttt
ggagtttcaaacagaatagttgaagggcttgttgttgggataaagcaaactactgatata
gaggaaaataagctcaagagcgtgcttgctgtaattgataagttttcaattgtttcaaag
gaacagatagaacttgctctttcaatgaaaaattactatgcgttgaatttgggcgaggct
ttgtcgcttgttatacctccttttgtgagtagcaaacagatatataatatctgtgctaaa
aaacatgaagaaaatagtaatatggatgatgatttaaaaaagttgtatgaaagtattttg
aaaaaaccggtaagcataaattcaaagcttgtaaaggagaacaaagaaaaaataataaaa
ctctttttaaaagggcttttggagtttgatttaaagaattttgctataaaagaagatagt
gagaagaatttgccattggtggaacctaattataatttgactgaagaacagaacaaagca
ttaaatagtataatctctgcgtttgatgaagggggatacagaaacattctcttatttgga
gtcacaggaagtggaaaaacagaggtttatataagagcgatacaatatgcaattgaaaaa
ggcaagagtgtcatattcatggtgccagaaatatcactcacaccacagatgatagaaaat
gttcaaagcagaataggcaacaaggttttagtatatcacagcaaaatgaaaagtatagac
aggctaaatagctggcttgctgccagaaacaaagaggcggttgtggtgattggtccgcga
tcagcagtttttgcccctgtcaagaaccttggtcttataattgttgatgaggagcatgaa
ccaagctataaatctgaaaaatcgccgcggataaatgctgttgaggttgcccagatgagg
gctaaaataaataatatacccattatacttggctctgcaactccatctattgagcattat
ttttatgcacaaaaaggaagatattttctttgtacgttgaaaaatagaataaacaagaat
ctgccagaagttttgattgttgatatgaaaaaagaaatcttggaaggtaacaagtccatt
tttagcaggcttttacttagtgaaatagagaacaacttgaaaaaaggggagcaggttctc
ctttttttaaacaggagaggttattctccaattgttatatgccgtgagtgcggttatgtt
tttatgtgcaaaaattgcagtatttcacttacataccacaaagaggggtatttgagatgt
cactattgcgggtataaagaggaatataggggtgtgtgtgcaaaatgtaacagtaaatat
gtcagacaatatggtagtggtacccagaagatagaggaggagataaaagcgtattttaaa
gatgcaagggttttgcgtatggacagtgatacaacttcaaaaaaagatgcgacagaacag
attgtgaaaaagttcagggaaaaagaggcagatattcttattggtacgcagatgattgca
aaagggttgcactttcctgacttgaccttggtgggtgtgatagatgcagatattcttttg
aatatgccagatttcaggagcagagaaagaacatttcaacttcttacacaggttgcagga
aggtctggcagggaaaagccaggtagagttataattcagacctttaatcctgaagactac
agtattgtgtttgcttcaaagcacgactatgaaagcttttatgctcaggagataaaactg
agaaaaatgatggaatatccaccttactcgtacgttgtaaattttattgttgtagcaagc
gaacagaacttggcaaaaaaaggaatagaacatgtatatactattctcaaagattttgaa
aatgaaactgacatgaaagtttatggacccagtgaaaatcccatatttaaaatagaaaat
caatataggtatcacatattggtgaagtttaaaagggctgggcaaatgattagtatagca
aatctaatcaaagaaagatataattataataatgcatcgcttatcatcgatgtaaatcct
ttagatacactttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (29)   

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