KEGG   Colwellia sp. PAMC 20917: A3Q34_09025
Entry
A3Q34_09025       CDS       T04511                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
coz  Colwellia sp. PAMC 20917
Pathway
coz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:coz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A3Q34_09025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:coz03021]
    A3Q34_09025
   03400 DNA repair and recombination proteins [BR:coz03400]
    A3Q34_09025
Enzymes [BR:coz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A3Q34_09025
Transcription machinery [BR:coz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A3Q34_09025
DNA repair and recombination proteins [BR:coz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A3Q34_09025
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AOW76984
UniProt: A0A1D8RV40
Position
complement(2095072..2096061)
AA seq 329 aa
MQGSVTEFLRPRLVGIETISATRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAISLEGKNEAVITLTKSGEGPVTAADIQHDGD
VTIANPNHVICNLTGEGSISMRIKIEMGRGYVPASVRRDAEDEDRAIGRLLVDASFSPVV
RIAYDVDSARVEQRTDLDKLVLDMETNGTLDPEEAIRRASTILAEQLDAFVELRDIKEVE
PKEEKPLFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtaaccgaattccttagaccgcgattggttggtattgaaaccattagc
gcgactcgtgctaaggtaactttagagccattagagcgtggttttggtcatactttaggt
aatgctttacgtcgcattcttctatcttcaatgccaggttgtgctgtaactgaagttgag
attgacggcgttctacacgaatacagtagtaaagagggtgtgcaagaagacatcatcgaa
atattgttgaaccttaagggattagctataagtttagaaggtaaaaacgaagctgttatt
actttaactaaatccggtgaaggccctgtaacggcagctgatatccaacatgacggagat
gtaacaatcgcaaatcctaatcatgtaatctgtaatttaacaggtgaaggttctatcagc
atgcgcatcaaaattgaaatgggacgtggttatgttcctgcttcagttagacgcgatgcc
gaggatgaagatcgtgcaatcggacgtttgttagttgatgcttcgttcagtccagttgta
agaattgcctacgatgttgactctgcccgagtagaacagcgtactgatttagacaaactt
gtacttgatatggaaaccaatggtacattggatccagaagaagctattcgtcgtgcttca
acaattttagctgaacagctagatgcgtttgtagaattgcgtgatattaaagaagtagag
ccaaaagaagagaaacctttatttgaccctattttgcttcgtccagttgatgatcttgaa
ttaacagttcgttcagcaaactgcttaaaagcagaagcaattcaatacattggcgattta
gtacagcgtgcagaagttgagcttcttaaaacacctaatttaggtaagaagtctttaaca
gaaatcaaagacgttttggcgtctcgtggtttatctttaggtatgcgccttgaaaattgg
ccgcctgaaagcatcgctgataacgactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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