KEGG   Carica papaya (papaya): 110816634
Entry
110816634         CDS       T05151                                 
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cpap  Carica papaya (papaya)
Pathway
cpap00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    110816634
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cpap01007]
    110816634
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpap03016]
    110816634
Enzymes [BR:cpap01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     110816634
Amino acid related enzymes [BR:cpap01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   110816634
Transfer RNA biogenesis [BR:cpap03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    110816634
 Prokaryotic type
    110816634
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N ArnB_C Dynamitin ALIX_LYPXL_bnd DUF4407 DUF244 ERM_C ADIP FapA DUF3490
Other DBs
NCBI-GeneID: 110816634
NCBI-ProteinID: XP_021900586
Position
Unknown
AA seq 520 aa
MGLQCTTIQTLKLAAVPISRSSSSYSSSYLCRAMPKALTLELLSRHNRSQKPAFTLLARA
LSVQTAPATESFDAQVARPQWKAAIDFKWIRDNKGEVAINIKNRNSNANLKLVLDLYEKM
SSLQKEVERLREERNAVAKKMKGKVEQSERQKLIEEGKNLKDQLATLDEELVKLKDELQQ
EAQCMPNMTHPDVPVGGEDCSTIRKMVGSPREFNFPVKDHVQLGKELDLFDFDAAAEVSG
SKFYYLKNEAVMLEMALINWSLSEAVKRGFTPLTTPEIVRSSVVEKCGFQPRGENTQVYS
IVGSDQCLIGTAEIPVGGIHMDSIIAESSLPLKYAAVSHCFRTEAGAAGAATRGLYRVHQ
FSKVEMFILCQPEESESFHEELIRIEEDLFASLGLHYKSLDMATEDLGAPAYRKFDVEAW
MPGLGRYGEISSASNCTDYQSRRLGIRYRPSELQSTSPKKSKGNLAPTQFVHTINATACA
VPRMIVCLLENYQQEDGSVIIPDPLRPFMGGLELISPKSG
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggggttgcagtgtacgaccatacagaccttgaaactggctgcagttcccatatctcgt
tcttcttcttcttattcttcaagctatttatgcagggcaatgccaaaagccctaacccta
gaattgttgtcccgccataatcgatctcaaaagcctgcctttactctcctcgccagagct
ctctctgtgcaaactgctcctgccacggagagctttgatgctcaagttgcaaggccacag
tggaaggctgctatcgattttaagtggataagagacaacaagggagaggttgctattaat
attaagaacagaaattccaatgctaatttgaagcttgtacttgatctatatgagaaaatg
tcaagtcttcaaaaggaagttgagaggcttagggaggaaaggaatgctgtagcaaaaaag
atgaaaggaaaagttgaacaatctgagcgccaaaagcttatagaagaaggaaagaatttg
aaagaccagctcgcgactttggatgaagaactcgttaaacttaaagatgaactccaacag
gaagctcagtgcatgcccaatatgactcaccctgatgtccccgttggaggggaagattgt
tcaacaataagaaagatggttggtagcccccgtgagttcaacttccctgtcaaggatcat
gtccagctcggaaaagaactggatctctttgattttgatgcagctgcagaggttagtggt
tcaaaattttactacctgaagaatgaagctgttatgttggagatggccctaataaactgg
tcactctcagaggctgtaaaaaggggcttcacaccattaacaaccccagaaattgtgaga
tcctctgttgtggaaaaatgtggctttcaacctcgtggagaaaatacccaggtttattcc
atagtgggtagtgaccagtgcctcatcggcactgcagagattcctgtggggggaattcat
atggattccattattgctgagtcatcattgcctttgaagtatgcagcagtttcccactgt
ttccgtactgaggcaggtgcagctggtgcggcaacaagaggtctttatcgagttcatcag
ttcagcaaggtggagatgttcattttgtgccaaccagaggagagtgagtcttttcatgag
gagctcattagaattgaagaagacttgtttgcatcactaggattgcattataaatctttg
gatatggccactgaggatttgggtgcacctgcttaccgtaagtttgatgtggaagcatgg
atgcccggtttaggtcggtatggtgagatatctagtgcatcaaactgtacagactaccaa
agcagacgactcggaatcaggtatcgtccatcagaattacaatcaactagcccgaaaaag
agtaaaggaaacctagctccaacacagtttgtgcacacgataaatgcaacagcttgtgca
gttccccggatgattgtatgtttactggaaaattatcagcaagaagacggttccgttata
atccctgacccattgaggcctttcatgggtggtctcgagttgatatcacctaaatccgga
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (47)   

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