KEGG   Citrobacter pasteurii: CUC49_20645
Entry
CUC49_20645       CDS       T05874                                 
Name
(GenBank) DNA-binding protein HU-alpha
  KO
K05787  DNA-binding protein HU-alpha
Organism
cpar  Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:cpar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpar03032]
    CUC49_20645
   03036 Chromosome and associated proteins [BR:cpar03036]
    CUC49_20645
   03400 DNA repair and recombination proteins [BR:cpar03400]
    CUC49_20645
DNA replication proteins [BR:cpar03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CUC49_20645
Chromosome and associated proteins [BR:cpar03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CUC49_20645
DNA repair and recombination proteins [BR:cpar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CUC49_20645
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2267
Other DBs
NCBI-ProteinID: AYL63859
Position
4185899..4186171
AA seq 90 aa
MNKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagactcaactgattgatgtaattgcagacaaagcagaactgtctaaaacacag
gctaaagctgctctggaatccactctggctgctattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgtgctgagcgcactggc
cgcaacccgcagaccggtaaagaaatcaaaatcgccgcagctaacgtaccggcatttgtt
tctggtaaagcactgaaagacgcggttaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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