KEGG   Clostridium pasteurianum BC1: Clopa_2341
Entry
Clopa_2341        CDS       T02645                                 
Name
(GenBank) recombination helicase AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
cpas  Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:cpas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpas03400]
    Clopa_2341
Enzymes [BR:cpas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Clopa_2341
DNA repair and recombination proteins [BR:cpas03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Clopa_2341
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD ResIII AAA_12 MAP AAA_30 CMV_1a
Other DBs
NCBI-ProteinID: AGK97205
UniProt: R4KC55
Position
2367269..2371261
AA seq 1330 aa
MGNNWTEEQREAIETRGCNLLVAAAAGAGKTAVLVERIIKMITDKEKAVDIDRLLVVTFT
NAAAAEMRERIGNAISRELFKNPESKLLQRQLVLLNKARITTIHSFCLDIIRNYFHLIDL
DPKFRIADETEAVLLKNETIEELFDKKYEESDKEEFLNLVECYCSNRDDSALMEMVLSLY
NFAKSSPWPKQWLQNMSEAFNIKEDFDFGSSIWAKSILSNVIIELTGINKVIEKALTIIN
NENTLEPYAKSYEEDLAMINDLVIESKSSWNSFIECLSSVKFPALKRCGKDVNRDKKDQV
QKIRDKYKKQIKDMQEEILSSTGDTMEDHIRELYPIMKCLGELVIEFDREYIKKKRSRGI
IDFNDFEHLTLQILTDTSEKEELVPSKAALELREKYEEILIDEYQDSNLVQEVILNSISR
NDSENPNLFMVGDVKQSIYRFRQAKPELFLDKYINYSSESGAKNRKILLFKNFRSRKVVV
DGANYIFKAIMSENIGELNYDEREELKAGAEFSEVNEDEFTELGVNELHIIEKSKVQDSN
NSESDTLDDEEEENIDNIRLEARMVASKIKELIDKKDKPYAVFDKNIDNYRSIQYKDIVI
LLRATAGWSPTFTEELKAFDIPVFADTGSGYFETTEIKTIISLLQIVDNPLQDIAMLSVL
RSPIASFTDEDLIDIRSLDRSSSFYELMKLVKSKYDELCTENNESIYAKNEGGSLENLKY
NREKSNRNTEEFKYSDEDIYAEYDEGSEYVNVEYIKVDEEKSISKKLAKKCYDFVRLLKG
FRDLALHMPIDEFIWHLYTETGYYSYAGAMPGGVQRQANLRILFQRAKAYENTSYKGLFN
FINFINRLKISSKDMGSAKILGENENVVRIMSIHKSKGLEFPVVILAACGKNFNLRDMTK
TVLFHHDLGIGPDYVNFKRRISYPTIFKNAIKKKIKLESLSEEMRILYVSLTRAKEKLII
TGAVRDIEAASKNWAEDINSNEEKISENIILRGMSYLDWICPAVIKHEAGEVLREKADVS
IEDNFKLSHESQWKIKLWTRDEIVKDNIILSENEVFSEDDTSSKVKLEHENKKLSKIEVL
KNILSEIETKAPRTPYYEEIDRRLSWKYKYDLAKGLPSSVSVTELKRQQSSEDEYSRNIF
PPVLKKRPVFLEERKGLTPAEKGTAMHAVMQRLDFSLPITKESIKSQMEKMIFKELITEK
QAEAVDIKKIERFFQGEIGKRMLSSLHIEREIPFVIRLKACDVYVELCEEDYKDESMMLQ
GAIDCYFEEKDGLVLVDYKTDYVTDKNVKAVVDKYRNQLKYYSQALTKITGKKVKEQYLY
LFYDGRVVKI
NT seq 3993 nt   +upstreamnt  +downstreamnt
atgggcaataactggactgaggagcaaagggaggctattgaaaccaggggatgtaatttg
ttagtagcggcggcggcaggtgcaggaaaaacggcagttcttgtagagagaataataaaa
atgattacagataaagagaaagctgtggatatagacagattattagttgttacatttact
aatgcggcagcagcagaaatgcgagagagaattggaaatgccatatcaagggagcttttt
aagaatcctgaatcaaagcttttgcaaagacaactagtgctgctgaataaggcaagaata
actacaattcactccttttgtcttgatataataagaaattattttcaccttatagatttg
gatcctaaattcagaatagctgatgagacagaagctgtgttattgaaaaatgaaactata
gaggaactttttgataaaaagtatgaggaatctgacaaggaagaatttttaaatctggta
gaatgttattgctccaacagagatgattcagctcttatggaaatggtactttctctttat
aattttgcgaaaagcagtccctggccaaagcagtggcttcagaatatgagtgaggctttc
aatataaaggaagactttgactttggcagttcaatttgggcaaagtcaattttatctaat
gtaataattgaacttacaggtattaataaagtaatagaaaaggctttgacaattattaat
aatgagaatactctggaaccttatgctaagtcttatgaagaagatctggcaatgataaat
gatctggtcatagagagtaaaagttcatggaacagctttatagaatgcttaagctctgta
aaatttccagcattaaagagatgtggtaaagatgtaaacagagataaaaaagatcaggta
caaaaaataagagataaatataaaaagcaaataaaagatatgcaggaagaaatattaagc
tctactggagatacaatggaggatcatattagagaattatatccgattatgaaatgcctt
ggagaactggttatagaatttgatagagaatacattaagaaaaagagaagtagaggtata
atagattttaatgattttgaacatcttacattgcagatacttacagatacaagcgaaaag
gaagaactagttccctccaaggcagcactggagcttagagaaaaatatgaagagattcta
atagatgaatatcaggacagtaatctagtacaggaggttatattaaattctatatcaagg
aatgacagtgaaaatccaaatttgtttatggtaggagatgtaaagcaaagcatatacaga
tttagacaggcaaagcctgagctttttcttgataaatatattaattattccagtgaatca
ggagcaaaaaatagaaaaatattattatttaaaaatttcagaagcaggaaagtagtagtg
gatggagctaactatatatttaaggccataatgtctgaaaatataggagaactcaattat
gatgaaagggaagaattaaaggcaggagcagagtttagtgaggtgaatgaggatgaattt
actgaacttggagtcaatgaacttcatataattgaaaaaagcaaagttcaagacagtaat
aattcagaatctgataccctagatgatgaggaagaagaaaatattgataatataagactt
gaggcaagaatggtagcttcaaaaataaaggaattaatagataaaaaagataagccctat
gctgtttttgataaaaatattgataactatagaagtattcagtataaggacatagtaata
ctgcttcgagccacagcaggttggtctcctacttttacggaggaattaaaggcttttgac
atacctgtatttgcagatacaggcagtggctattttgaaactacggaaataaagacaata
atttcattattgcaaatagtagataatcctctacaggatatagcaatgctttcggtatta
cgttctcctatagcttcctttacggatgaggatcttatagatataaggtcactggataga
agcagctccttttatgaattgatgaagcttgtaaaaagtaaatatgatgaactatgtact
gaaaataatgaaagtatttatgctaaaaatgaaggaggcagcctagagaatcttaaatat
aatagggaaaagtcaaatagaaatactgaggaatttaaatatagtgatgaggacatctat
gcagaatatgatgagggctctgaatatgttaatgtagaatatataaaggtggatgaagaa
aaaagtataagcaagaaattggcaaaaaaatgttatgattttgtaaggttacttaaagga
tttagagatttggcactgcatatgcctatagatgagtttatatggcatttatacactgaa
acgggctattacagctatgctggagctatgccaggaggagttcaaagacaggcaaattta
agaatactgtttcagagggcaaaagcatatgaaaatacaagctataaggggctatttaat
tttataaacttcataaacagattgaaaataagcagcaaagacatgggaagtgctaaaata
ttaggtgagaatgaaaatgtagtgcgaataatgagtattcataagagtaaaggcttagag
tttcctgtagttattctagcagcctgtggtaagaattttaacttgagagacatgacaaaa
actgtattatttcatcatgaccttggaatagggccggattatgttaattttaagagaaga
atatcatatccaactatatttaaaaatgccattaagaaaaaaataaagctggaaagtctt
tctgaggaaatgagaatactctatgtatcattaaccagagctaaggaaaaacttataata
acaggtgctgtaagggatattgaagctgcaagtaaaaactgggcagaggatataaatagt
aatgaagaaaagatatcagaaaatataatacttaggggaatgagctacctggattggata
tgccctgctgttattaagcatgaagctggagaagttttaagagaaaaagctgatgtatct
atagaagataatttcaaacttagtcatgagtctcaatggaaaataaagctttggactaga
gatgagattgtaaaagataatataatattgtctgaaaatgaagtttttagtgaggacgat
actagtagtaaagttaaacttgagcatgaaaataaaaaactcagtaaaatagaagtactt
aaaaatattctctctgaaatagaaactaaagcgccaagaactccttattatgaggaaata
gacagaagactcagctggaaatataaatatgatctggctaaggggttaccttccagtgtg
tcggttactgaattaaaaaggcaacaaagctctgaggatgaatattccagaaatatattt
ccgccagtattaaagaaaagaccagtgttcttggaggaaagaaaaggacttacgcctgca
gaaaagggaaccgccatgcatgcagtaatgcaaagacttgattttagcttacctataaca
aaggaaagtataaaatcacaaatggaaaagatgatttttaaggagcttataacagaaaag
caagctgaagctgtagatataaagaagatagaaagattttttcagggtgaaattggtaaa
agaatgctttcatcattacatatagaaagagagatcccttttgtaatcagacttaaggct
tgtgatgtctatgtagaattgtgtgaagaagattataaagatgaaagtatgatgcttcag
ggagctatagattgctattttgaagaaaaagatggtcttgttcttgtagattataaaaca
gattatgtaacagataaaaatgtgaaagctgtagtagacaagtatagaaatcagttgaaa
tattattctcaggcacttaccaagattacaggaaagaaagtcaaggaacagtatttatat
ttattctatgatggaagagttgtaaaaatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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