KEGG   Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c17880
Entry
CLPA_c17880       CDS       T03753                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cpat  Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03420  Nucleotide excision repair
cpat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLPA_c17880
   03430 Mismatch repair
    CLPA_c17880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpat03400]
    CLPA_c17880
Enzymes [BR:cpat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLPA_c17880
DNA repair and recombination proteins [BR:cpat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLPA_c17880
   MMR (mismatch excision repair)
    Other MMR factors
     CLPA_c17880
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C Viral_helicase1
Other DBs
NCBI-ProteinID: AJA51846
UniProt: A0A0H3J7G4
Position
1927557..1929569
AA seq 670 aa
MTKEEMQNEVAKILCEKNSDLTCDECYKSKKDIDYICKNSNHCRISEKTEKQLQYILSSI
NESTFLEACPGSGKTEVVGMKSAYEIKRWDSNSKNGMAILTFTNDATSVIRERANQFSKK
TSFYPHFIGTISSFIHQYIAQPFGYSEINYSGIDGDYSLKLIDADLNAVTNPWLKKYKCS
IPYIGKNGKRTDIFANQIFYDEKNRNFYIKIDKIYLSINEYYDIQQMQKHIKDSRKKFNN
NYYYSNSYFYNEFKKCKNNFLKDGFATYEDMNCIAYQILDNDTIVKKISRKFPLIIVDEC
QDLSWIEIEILNKLKEKGTILHFVGDINQSIFEFKEIALESEYTSEYIKRLKKLELTDNF
RSCQPIVNLSNKLMSISNTIKGIEENKFLENSVLYLEYENPEEAVTKYLRILNHFKISES
KSCIIVKQNILKNQLLCNINDNERHLLISSIQLWGKENPNSKKKSLEYAGKQISKWFGGA
RSKSSYYCPKDITSVFAWRIFLKDILNDCYINSKLINYDRKYGKWYCDARKELPSIIKKN
YCKIQCFDNLIRDFDEIFSSKWYIGKDVQEDILILNSELKNNDSAIKISTVHGSKGCTYD
STLVISSETAKSESGHWKSHWIEGTDEDRRVGYVASTRAKFLMIWAVPTLGKKDKELIEG
YGFQNGNTIV
NT seq 2013 nt   +upstreamnt  +downstreamnt
gtgactaaagaagaaatgcaaaatgaagttgctaaaatattatgtgaaaaaaatagtgat
ttaacatgtgatgagtgctataagagcaaaaaagatatagattatatttgcaaaaattca
aatcattgtagaatatcagaaaaaacagaaaaacagcttcagtatattttgtcttctata
aatgagagtacatttttagaagcttgtcctggaagcggaaaaacagaagtagttggaatg
aaatcagcttatgaaattaaaaggtgggatagcaattctaaaaatggaatggctatttta
acttttacaaatgatgcaactagtgttattagagaaagagcgaatcaatttagtaaaaaa
acatcattctatcctcattttataggtactataagcagctttattcatcaatatattgct
caaccttttggatatagtgaaataaattactcaggtatagatggagactattctttaaag
ttaattgatgctgatttaaatgctgttactaatccttggctaaaaaaatacaaatgctcg
ataccgtatataggtaaaaatggaaaaagaacagatatattcgctaatcaaatattctac
gatgaaaaaaaccgaaatttttatataaaaattgataaaatttatttatcaataaatgaa
tattatgatatccaacaaatgcagaaacatattaaagatagcagaaaaaaatttaataat
aattattattactcaaattcctatttttataatgaatttaaaaagtgtaaaaataatttt
cttaaagatggttttgcaacatatgaagatatgaattgtattgcctatcaaattttagat
aacgatacaatagtcaagaaaatatcaagaaaatttcctttaattatagtagatgaatgc
caagatttatcatggatagaaattgaaatattgaataaattaaaggaaaaaggaacaata
ttacattttgtcggggacataaatcaatctatatttgaatttaaggaaatagcattagaa
tctgaatatacatctgaatacattaaaagattaaaaaagttagaacttactgataatttt
aggagttgccagcctattgtaaatttatctaataagttgatgagtataagtaatacaata
aaagggatagaagaaaataaatttttagaaaatagtgttctatatttagagtatgaaaat
ccggaagaagctgttactaaatatttaagaatattaaatcattttaaaatatctgagagc
aagtcttgtataattgtcaaacagaatatattaaagaatcagttgctatgtaatataaat
gataatgaaagacatttgttaatatcatcaattcagctttggggaaaagaaaatcctaat
tcgaaaaagaaatcactggaatatgcaggaaagcaaatttcaaaatggtttggaggagct
agaagtaaaagtagttattattgtcctaaagatataacttcagtattcgcatggaggata
tttttaaaagatattttaaatgattgttatattaatagcaaattaataaattatgataga
aaatatggcaagtggtattgtgatgcaagaaaggaattacccagtattattaagaaaaac
tattgtaaaatacaatgttttgataatctaataagagactttgacgaaattttttcttct
aaatggtatataggaaaagatgttcaagaagacattttaatattaaatagtgaattaaag
aataatgatagtgcgataaagatatcaacagtgcatggatctaaaggctgtacatatgat
agcactttagttatatctagtgagacagctaaaagtgaatctggacattggaaaagtcat
tggatagaaggaacagatgaagataggagggttggctatgtagcaagtacaagagctaaa
tttcttatgatttgggctgttccaactcttggtaaaaaggacaaagagttaatagaaggt
tatggatttcagaatggcaatactatagtttaa

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