KEGG   Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c36460
Entry
CLPA_c36460       CDS       T03753                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cpat  Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLPA_c36460 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpat03021]
    CLPA_c36460 (rpoA)
   03400 DNA repair and recombination proteins [BR:cpat03400]
    CLPA_c36460 (rpoA)
Enzymes [BR:cpat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CLPA_c36460 (rpoA)
Transcription machinery [BR:cpat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CLPA_c36460 (rpoA)
DNA repair and recombination proteins [BR:cpat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CLPA_c36460 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N
Other DBs
NCBI-ProteinID: AJA53690
UniProt: A0A0H3J8Y4
Position
complement(3922648..3923595)
AA seq 315 aa
MLEIEKPKIECVESTEDGSYGKFVIEPLERGYGITLGNSLRRILLSSLPGVAANSIKIEG
VLHEFSTIKGVKEDVTEIILNIKSLALKMSGDGPKVIYIDSEGNGEVTAGDIKTDEDVEV
VNKDLHIATLDNDGKLYMEIEVNRGRGYVTQNRNKREDMPIGTIPVDSIYTPIKRVNFSV
ENTRVGQITDYDKLTIEIWTNGTIRPEEAISLSAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERSMEDMMKVRNLGKKSLEEVE
QKLEALELSLKQSEE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgttagaaatagaaaagccaaaaattgaatgtgtagaatctactgaggatggttcttat
ggtaagtttgttattgaacctttggaaagaggttatggaattactttaggaaattccctc
agaagaattttactctcatcactacctggagttgcagccaattctattaaaatagaaggt
gtacttcatgaattttcaactataaaaggtgttaaagaagacgtcacagaaataatactt
aacattaaatctttagctttgaagatgagtggtgatggtcctaaagttatttatattgat
tcagaaggaaatggagaagttactgctggagatataaaaacagatgaagatgtagaggtt
gttaataaagatttacatatagctactcttgataatgacggaaaattatatatggaaatt
gaagttaacagaggcaggggatatgttactcaaaatagaaataaacgagaagatatgcct
ataggaactattccagtggattcaatatatacaccaataaagagagttaattttagtgtt
gaaaatacaagagtaggtcagataactgactatgataagctaactattgaaatatggact
aatggaactataagacctgaagaagctataagcttatcagctaaaatacttattgaacat
tttaaattatttatgactttaacagatcatgcagatgatgttgaaattatggtagaaaaa
gaagaagacaaaaaagaaaaagtacttgaaatgaccatagaagaactggatctttcagtg
aggagctataactgtttaaagagagctggtattaatacggttcaagaattaacagaaaga
tctatggaagatatgatgaaggtaagaaatttaggtaaaaaatcacttgaggaagttgaa
caaaagcttgaagctttggaactatcattaaaacaaagtgaagagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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