KEGG   Chlorobium phaeobacteroides BS1: Cphamn1_0479
Entry
Cphamn1_0479      CDS       T00709                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cpb  Chlorobium phaeobacteroides BS1
Pathway
cpb03030  DNA replication
cpb03430  Mismatch repair
cpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cphamn1_0479
   03430 Mismatch repair
    Cphamn1_0479
   03440 Homologous recombination
    Cphamn1_0479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpb03032]
    Cphamn1_0479
   03400 DNA repair and recombination proteins [BR:cpb03400]
    Cphamn1_0479
Enzymes [BR:cpb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cphamn1_0479
DNA replication proteins [BR:cpb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cphamn1_0479
DNA repair and recombination proteins [BR:cpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cphamn1_0479
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ACE03443
UniProt: B3EM65
Position
503502..503981
AA seq 159 aa
MNSVPLLITNEMLKDKPCCEEVMLEFSGFIADHNIVAHNASFDRRFLDSELKRANRKYEG
SCCCSLLLSRRVYQDSPNHTLQTLVSHAGIPETGTFHRALADAEMTAYLWLSMIDRIRRQ
YGIPEISFDQLRELSRVDKLYAHRYLCALAEEPWNNVKT
NT seq 480 nt   +upstreamnt  +downstreamnt
gtgaatagcgtcccccttctgattaccaacgagatgctgaaagacaagccctgttgcgaa
gaggtgatgcttgagttttcagggtttatcgccgatcataacatcgtcgcgcacaatgcg
tcattcgacaggcgttttctggattccgagctgaaacgggcgaaccggaaatatgaaggc
tcctgttgctgctctctgctcctttcaagaagggtgtatcaggattcgccgaatcatacg
ttacagacactggtgtctcatgcgggtatcccggagaccggaacgtttcaccgcgcgctg
gcagatgccgagatgaccgcgtatttgtggctgtcgatgattgatcgtattcgtcgtcaa
tacgggataccggagatttcctttgaccagttgcgtgaactctcaagagtcgacaagctc
tacgcccatcgatacctttgcgctctggcagaggaaccctggaataacgttaaaacgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system