KEGG   COMPOUND: C00077
Entry
C00077                      Compound                               
Name
L-Ornithine;
(S)-2,5-Diaminovaleric acid;
(S)-2,5-Diaminopentanoic acid;
(S)-2,5-Diaminopentanoate
Formula
C5H12N2O2
Exact mass
132.0899
Mol weight
132.16
Structure
Remark
Same as: D08302
Reaction
R00551 R00565 R00664 R00665 R00666 R00667 R00668 R00669
R00670 R00671 R00672 R01343 R01398 R01686 R01989 R02282
R03477 R05547 R10466 R10789 R10790 R10933 R11801 R12506
R13308 R13429 R13430
Pathway
map00220  Arginine biosynthesis
map00330  Arginine and proline metabolism
map00470  D-Amino acid metabolism
map00480  Glutathione metabolism
map00997  Biosynthesis of various other secondary metabolites
map00998  Biosynthesis of various antibiotics
map01060  Biosynthesis of plant secondary metabolites
map01064  Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04148  Efferocytosis
Module
M00028  Ornithine biosynthesis, glutamate => ornithine
M00029  Urea cycle
M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
M00763  Ornithine biosynthesis, mediated by LysW, glutamate => ornithine
M00785  Cycloserine biosynthesis, arginine/serine => cycloserine
M00844  Arginine biosynthesis, ornithine => arginine
M00876  Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A
M00972  Proline metabolism
Network
nt06010  Urea cycle
nt06033  Glycine, serine and arginine metabolism
nt06535  Efferocytosis
Enzyme
1.5.1.24        1.14.13.195     1.14.13.196     2.1.3.3         
2.1.4.1         2.1.4.2         2.1.4.3         2.1.4.4         
2.1.4.5         2.3.1.35        2.3.1.127       2.3.2.30        
2.6.1.13        3.5.1.14        3.5.1.16        3.5.1.20        
3.5.1.132       3.5.3.1         3.5.3.25        3.5.3.27        
4.1.1.17        4.3.1.12        5.1.1.9         5.1.1.10        
5.1.1.12
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Other amino acids
    C00077  L-Ornithine
Other DBs
CAS: 70-26-8
PubChem: 3377
ChEBI: 15729
KNApSAcK: C00001384
PDB-CCD: ORN[PDBj]
NIKKAJI: J9.177D
KCF data

ATOM        9
            1   C1c C    24.3902  -16.1988
            2   C6a C    23.1783  -15.5055
            3   C1b C    25.6019  -15.5055
            4   N1a N    24.3902  -17.6028
            5   O6a O    21.9609  -16.1988
            6   O6a O    23.1783  -14.1015
            7   C1b C    26.8196  -16.1988
            8   C1b C    28.0315  -15.5055
            9   N1a N    29.2491  -16.1988
BOND        8
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     2   6 2
            6     3   7 1
            7     7   8 1
            8     8   9 1

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  All links  
Chemical substance (29)   
   PubChem (1)   
   ChEBI (1)   
   HMDB (1)   
   KNApSAcK (1)   
   MASSBANK (23)   
   NIKKAJI (1)   
   PDB-CCD (1)   
All databases (29)   

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