KEGG   Chlamydia pecorum PV3056/3: CPE1_0961
Entry
CPE1_0961         CDS       T02854                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cpeo  Chlamydia pecorum PV3056/3
Pathway
cpeo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CPE1_0961 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpeo03400]
    CPE1_0961 (recD)
Enzymes [BR:cpeo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CPE1_0961 (recD)
DNA repair and recombination proteins [BR:cpeo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CPE1_0961 (recD)
SSDB
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 Viral_helicase1 SLFN-g3_helicase UvrD-helicase DEAD PhoH Helicase_RecD AAA_11 AAA_22 PIF1 ResIII IstB_IS21 nSTAND3 AAA_25 UvrD_C AAA_28 ATPase SNF2-rel_dom RNA_helicase CbiA T2SSE AAA
Other DBs
NCBI-ProteinID: AGW38428
Position
complement(1096537..1098072)
AA seq 511 aa
MIESSPKIPDVLKDLLQQHVVSPLDVVFARRHTPPNTEKAMLFLAASSALWRHGYPFLCL
LEDRLVPSVPGLSEQVFFQGFQEFSKNSSEELFVVAEKKLYLRSLYETRKKLFQKLTRVS
LAQPMFPSLKHLPKELSQAQAHTLQQVSQRCFSIVCGGPGTGKTFLAIQLIVALINENPH
MRIIVVSPTGKVAAHFRKVLANYSLPDTAIAVHTIHHFLQEYANQQYSTMDVLIVDEGSM
VDFHLLHSLVQTLPGRYTPCGKVLSASMIIFGDKNQLPPIGIGAGNPLQDLIETFPESTM
HLEVSYRAKTQDIQEIAQAILSHQMVPFSPLPPFSVAIELFADAFQRALSRGVSLCVLSP
MRLGVWGYVNLNRFIHHELQKRNPLLPVPIIVSNRYETWGLCNGDTGVLSVQQQKLMFSQ
EIVIDAQAFSNYTYNYAMSVHKSQGSEYDEVLVVVPKGCEIFESSLLYTAVTRAKSKLSI
WADAETLTKIIKKPRKYSFQGLDKALALMKT
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgatagaatcttccccaaagatcccagatgttcttaaagatttgctacaacagcatgtc
gtttcccctttagatgttgtttttgcacgtagacacacccctccaaacactgaaaaagca
atgctatttttagcggcctcttcagctttatggcggcatggctatcccttcctctgtctt
ttagaagatcgcttggtgccctcagttcctggactctctgaacaagttttttttcaaggg
tttcaggagttttccaaaaactcttctgaggagttatttgttgttgctgaaaaaaagttg
tatttgcgctccctatatgagacgcgcaaaaaactttttcagaaacttaccagagtgtct
ttagcacaacctatgttcccgagcttaaaacacctccctaaagagctatctcaagcacaa
gcgcatactttgcagcaagtttctcaaagatgtttttctatagtttgtggggggcctggg
acgggaaagacgtttttagccatacagctgatagtagcattaattaatgagaatccccat
atgcgtattattgtggtttcccctacagggaaggttgcagcgcatttccgcaaggttctt
gctaactattctctaccggacacagccattgcggttcatacgatacatcattttttacaa
gaatatgccaatcaacaatacagcacaatggatgttcttatcgttgatgaaggctccatg
gtagattttcacttgcttcatagtcttgtacaaactcttcctgggcgctataccccatgt
gggaaggtactatccgcaagtatgatcatttttggagataaaaatcagcttccccccata
ggaattggtgcggggaatcccctacaagatttaattgagactttcccggaaagcacgatg
catcttgaagtctcttacagagcaaaaacccaagatatccaagagattgcccaagcgatc
ttgtcacaccagatggtccccttctctccccttcctcctttttccgtagctatagagctt
tttgcagacgcttttcaacgagcattatctagaggggtaagcttgtgtgtgttgtctcct
atgcgcttgggagtgtggggatatgtaaatttaaatcgttttattcatcatgaacttcaa
aaacgtaatcccctcttgcctgtcccaattatagtttccaaccgttatgaaacttgggga
ttatgtaatggagatacaggagttctttctgttcaacaacaaaagctcatgttctctcaa
gagatagttatagatgctcaggcattctctaactatacctataactatgccatgtccgtc
cataagagccagggaagcgaatacgatgaagttctcgttgtcgtgcctaagggatgtgaa
attttcgaatcttctttgctctatactgctgtgacacgagcaaaaagtaaactctctatt
tgggctgatgctgaaacactaacgaaaatcataaaaaaaccccgaaagtatagctttcag
ggtttagataaagcattagcactgatgaaaacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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