KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111780291
Entry
111780291         CDS       T05351                                 
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    111780291
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cpep01007]
    111780291
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpep03016]
    111780291
Enzymes [BR:cpep01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     111780291
Amino acid related enzymes [BR:cpep01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   111780291
Transfer RNA biogenesis [BR:cpep03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    111780291
 Prokaryotic type
    111780291
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 EAD7 tRNA-synt_2d
Other DBs
NCBI-GeneID: 111780291
NCBI-ProteinID: XP_023516422
Position
LG18:7133815..7141426
AA seq 591 aa
MPTVSVGRDRLFAALGRTYSQEEFEELCFRFGIELDDVTTEKAIIRKEKHLEEEADEDEE
VIYKIEVPANRYDLLCLEGLAQALRIFNKQEETPRYKLSNISKESMHKMHVNPETSLVRP
YVVCAVLRDITFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALPPS
AINFVPLKQTKSFRADELMEYYKSDLKLKKFLHIIEKSPVFPVLFDRNRTVLSLPPIING
AHSAITLKTKNVFIECTATDLTKANIVLNTMVTIFSALCKKKFEIEPVEVIYSDGKSNIY
PELSLYNMEVSLSYITNCIGVSLEAEEVTNLLNRMQLHAEQSVSGDKSSITISVPPTRSD
VLHPCDVMEDVAIAYGFNNIPKSKPASLQPLPLNEFSDLIRGEIAMSGFTEVLTWILCSY
KENFAMLKREDDKSTAVIIGNPRSTDFEVVRTSLMPGLLKTVGHNKDHPKPIKIFEVGDV
SLLDDAKDVGARNHRHLAALYCSANSGFELIHGLVDRIMEVIGASFVTVGDETGYYIKCS
DNPEFLTGRQAHIIYKGRKIGTFGIVHPEVLNNFDIPDPCSFVELNIESFL
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgccgaccgtaagcgtcggaagagatcgcctatttgctgccctcggaagaacttactct
caggaagagtttgaagagctgtgctttaggtttgggattgagcttgatgacgttacgaca
gagaaggcgatcattaggaaagagaagcatttggaagaagaagcggatgaagatgaagaa
gtcatctacaagatcgaggtccccgctaacagatacgatttgctctgtcttgaagggctt
gctcaagcactgcgcatttttaataagcaagaagagacacccagatataaattatccaat
atcagcaaggaatctatgcacaaaatgcatgtaaacccggagacttccttggttcgccct
tatgtggtttgtgctgttttgagagacataacttttgatgaagcaagttataatagcttt
attgatctgcaagacaaacttcatcagaatatatgtcgacggagaactcttgttgccatc
ggaactcatgacctggatacacttgaaggccctttcacctatgaggctttgccaccatca
gccataaactttgtgccactaaaacagacgaagagtttcagagctgacgagctaatggag
tactataaatcagatttgaagctgaagaagttcctgcacataatagaaaaatcacctgta
tttcccgttttgtttgatcgcaacagaactgttttgtctttaccaccaattatcaatggt
gcacattcggctattactttgaagacaaagaatgtgtttattgaatgcactgcaactgat
ctgacaaaggcaaatattgtcttgaatactatggtaactatattttcagcactgtgcaaa
aagaagtttgaaattgaaccagttgaagtgatatattcagatgggaagtcgaatatttat
ccagagttatctctctacaatatggaagtttctctgtcttatatcactaactgcattgga
gtctcattggaggcagaagaggttaccaatttgttaaataggatgcaattgcacgctgag
cagtcggtatctggtgacaagtctagtataactatatctgtgcccccaacaaggagtgat
gtgcttcacccatgtgatgtcatggaggatgttgctatagcttatggattcaataacatc
ccaaagagtaaaccagcatctttgcagcctctaccattaaatgagttcagtgaccttatc
agaggagagattgcaatgagtgggttcacggaggtacttacgtggatcctatgttcttat
aaagagaactttgccatgttaaagcgtgaagatgataaatctactgctgttatcattgga
aatccccgttcaacagattttgaggttgtacgcaccagtcttatgcctggtcttttgaaa
actgttggacataataaggatcatccaaagcccataaagatatttgaagttggtgatgta
tcattactggatgatgcaaaagatgttggtgcaagaaatcatcgtcatcttgctgctcta
tattgcagtgccaattctggatttgagttgattcatggtttggtcgacagaataatggaa
gtcataggagcttcttttgttacagttggtgatgaaactgggtattacataaagtgttca
gataatccggagtttcttactggtagacaagcccacatcatttataaaggaaggaaaatt
ggcacgtttggcattgttcatcctgaggttttgaataactttgacattcctgatccatgt
tcctttgttgaacttaacatcgagagctttttatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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