KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111783398
Entry
111783398         CDS       T05351                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111783398
   03009 Ribosome biogenesis [BR:cpep03009]
    111783398
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     111783398
Spliceosome [BR:cpep03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    111783398
Ribosome biogenesis [BR:cpep03009]
 Eukaryotic type
  90S particles
   Helicases
    111783398
  Pre-60S particles
    111783398
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII SecA_DEAD AAA_22 Nic96
Other DBs
NCBI-GeneID: 111783398
NCBI-ProteinID: XP_023520092
Position
LG20:537726..542936
AA seq 615 aa
MVALDEKVPSSSEVDAMDKRRKRKRPKKNLPSTGAEESEPQNPMKAEEEGEGDAEGNVSK
EKVKKGEKMNKKKRKTKKKGELEEEGHKTANDDEGEDGVDGKVEKDEEKVNEKKKVKTGG
SGIMSTVAFDSLELSEKTLRAIKDMGFQHMTQIQARAIPPFLTGKDVLGAARTGSGKTLA
FLIPAVELLHHISFTPRNGTGVIVICPTRELAMQTHDVAKELLKYHSQTLGLVTGGSSRQ
AEADRITKGVNLLIATPGRLLDHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIIK
LLPKNRQTALFSATQTQKVEDLVRLSFQSTPIYIDVDDGRTKVTNEGLQQGYCVVPSAKR
FVLLYSFLKRNLSKKIMVFFSSCNSVKFHADLLRYIKVDCMDIHGKQKQQKRTSTFFAFN
KAETGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIP
EELQFLRYLKEAKVPVKEYEFSDKKLANVQSHLEKLVGSNYYLNKSAKEAYRSYLLAYNS
HSMKDIFNVHRLDLQAIAASFCFSNPPKVNLNIDSSASKFRKKTRKVEGSKNRFSESNPY
GRKNGDEDERQFVRY
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggttgcactggacgagaaagttccctcttcatcagaggttgatgcaatggacaaaagg
cgcaagaggaagagaccaaagaaaaatcttccttcaacgggtgctgaagaatcggaacct
caaaatccaatgaaagctgaagaagaaggggaaggagatgctgaaggtaatgtatcaaag
gagaaagtgaaaaaaggtgagaagatgaacaagaagaagaggaagacgaaaaagaagggc
gagttggaggaggaaggacataaaactgctaatgatgatgagggagaggatggcgtggat
gggaaagttgagaaggatgaggagaaagtgaacgagaaaaagaaggttaagactggtggc
tcaggaattatgagtacagttgcatttgattcgcttgaattgtcggagaaaactctccgg
gcgattaaagacatgggatttcagcatatgactcagattcaagccagagcaattccacct
tttctgactggcaaagatgttcttggagccgcaaggactggatccgggaaaacccttgcc
tttcttataccagctgttgaactactccatcacatcagctttactcctcgtaatggaact
ggtgttatcgttatttgcccaacacgggagcttgctatgcagacacatgatgtggcaaaa
gagcttctcaaatatcattcacagacacttggccttgttactggtggttctagccgacaa
gctgaggcagatcgtattacaaagggggtcaatctgttaatagcaacccctggtcgactt
cttgaccatcttcaacataccaagaattttgtgtttaaaaatttgaagtgcctcataatt
gatgaagcggacaggatattggaaaccaattttgaggaggaaatgaaacaaattataaag
ctcctaccaaagaatagacagactgctttattctcagcaacccaaactcaaaaggttgaa
gaccttgttcgcctgtcttttcagtcaactcctatttatattgatgtagatgatggaaga
acaaaggtcactaatgaggggttgcaacaaggttattgtgttgtgcccagtgctaaaaga
ttcgttcttctatattccttcttgaagagaaatttatctaagaaaattatggtcttcttc
tcgtcttgtaactccgtcaaattccatgcggaccttcttagatacattaaggtcgattgc
atggatattcatggaaaacaaaagcagcagaagagaacttctaccttctttgccttcaac
aaggccgagacggggatcctactatgtactgatgttgctgcacgtggacttgacatcccc
gctgttgattggattgtgcagtatgatcctccagatgaacccaaggaatatattcacaga
gttggtcgaacagctcgaggcgaaggtagcaaaggaaatgccctacttttcttgattcct
gaagagcttcaatttcttcgctatttaaaggaagcaaaagttcctgtcaaagagtatgag
ttcagtgataagaaattagccaacgtgcagtctcatctggaaaagctggttgggagcaat
tattatttgaacaagtccgctaaggaagcttacagatcctatttattagcttacaattca
cactctatgaaagatattttcaacgtccaccgccttgatctacaggcgattgctgcttca
ttctgcttttccaaccctccaaaggtcaaccttaacatcgacagcagtgcctcaaaattc
aggaagaaaacgcgcaaagtagaagggagcaaaaaccgattcagtgagagcaacccttat
gggaggaagaatggcgatgaggatgagagacaatttgtaagatactaa

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