KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111787999
Entry
111787999         CDS       T05351                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cpep01002]
    111787999
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111787999
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111787999
Peptidases and inhibitors [BR:cpep01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   111787999
Ubiquitin system [BR:cpep04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    111787999
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 111787999
NCBI-ProteinID: XP_023523898
Position
LG01:complement(3340761..3351441)
AA seq 637 aa
MALQLQMSWQPSLLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTYTPPLANFCLRNQHSSL
CDSASSNAERKRECPFCILERRIVRSLSLDLTLDSPLKIQNCLRIFAEHFRLGRQEDAHE
FLRYVIDACHNTCLRLKKLRRTGGGASGSSTVVKEIFGGALQSQVKCLSCGNDSNKVDEI
MDISLDVLHSSSLKEALQKFFQLEVLDGSNKYKCDNCKKLVVARKQMSILQAPNTLVVQL
KRFEGIFGGKIDKAIAYEESLQLSNFMCKGSQDPRPEYKLFGTIVHSGLSAESGHYYAYI
KVYVDHIHIKPTKFKTRSDPYKEVLSEKVYILFFSRTNQRPVTANAALGSNGVKSHEGNG
IEASKISKPSAVTKTAQTKSHVEQSSRKELSSLSKVEKPTFSQRGKSYMNGHSNSVRAPS
TINGKIVLEKDQSIKENEKENVNSLHLENGVRHKSFLGNGNSKKSNEVADDVTERERKSV
LMNGNGNGESVAMKEDKYDQCDGNPMNNKFTAGNGSGHEEVDNAVNCSSEIKMAKRKSDL
CILFQQDALSRKRVEELTEDLKRETFSVLRTCGWSKEVFSCMRSRKRLCLREMGSTPGSN
DLKKLLIADAKQKFISRIPEVLKEDLIKKLQVFSQEK
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggccttgcaattgcaaatgagttggcaaccgagtttactgagtcagaagcggcgaaat
ggcccccctctcggtctcagaaacctaggcaatacctgctacctcaacagcgtccttcag
tgcctcacttacacccctccccttgccaatttctgccttcgaaaccagcactcttctcta
tgcgattctgcttcctccaacgcggagagaaagcgtgaatgtccgttttgtattctggaa
aggcgtatagtgaggtctttgagcttggatctcaccttggactcgcctctcaagatccag
aactgtctcaggatcttcgccgagcactttcgcttgggccgccaggaggacgcccacgag
ttccttcgttatgtcatcgatgcttgccacaacacctgcctccgcttgaagaagctgcgt
cgaactggcggaggtgcgagtggaagctccacggtggtgaaggagattttcgggggtgcc
ttgcagagccaggtgaagtgtttatcttgtggaaacgactccaataaggttgatgagata
atggatattagtcttgatgttttgcatagtagttctcttaaagaggcattgcagaagttc
tttcaactggaagttttagatggcagtaataagtacaagtgtgacaattgtaagaagttg
gtggtggcgaggaagcagatgtctatacttcaagcaccgaatactcttgtcgtccaattg
aagagatttgaaggcatatttggtggtaagattgacaaggccattgcgtatgaggagagt
ttacaactttcaaattttatgtgcaaaggaagtcaggatccacgtccagagtacaagctc
tttggtaccatagtgcattcaggcctttctgcagaatctgggcactattatgcatatatc
aaggtctatgtggaccatattcatataaagcctactaaatttaagacaagatcagatcct
tacaaggaggtcttgtcagagaaggtgtatattctctttttctctcgtacgaaccaaagg
ccagtaactgcaaacgcagctcttggttcaaatggtgtaaaatctcatgaaggtaatggc
attgaagcatccaaaatctcaaaaccttctgcggtaactaaaacagcacagacaaaatcc
catgttgagcaatcttctcggaaagaactttcaagtctatctaaggtagaaaaaccaact
ttcagtcagcgaggaaaatcttatatgaatggacattctaattctgtacgagctccttcc
accattaacgggaagatagttcttgagaaggatcaatccatcaaggagaacgagaaagaa
aatgtaaactcgttgcatttggaaaatggtgtgagacataaatcttttcttgggaatgga
aatagcaagaaaagtaatgaagttgctgatgatgtcactgagagggaacgtaaatctgtg
ttaatgaatggtaatggtaatggcgagagtgtggcaatgaaagaagataaatacgatcag
tgtgatggtaatcctatgaataacaagttcactgcaggaaatgggtctggtcatgaagaa
gtggataatgcagtcaactgctcctctgagatcaaaatggcaaaaagaaaatcagacctc
tgtatcttgtttcaacaggatgctctatctcgaaaaagagttgaagaactgacagaagat
ctcaagagagaaactttctcagttttaagaacatgcggttggtcaaaggaggtcttcagt
tgcatgcgttcaaggaagagattgtgtttacgagaaatggggagcactccaggcagtaac
gatttaaagaaattgctgattgcagatgccaagcaaaagtttatttcacggataccagaa
gttctaaaagaggaccttataaaaaagcttcaagtatttagtcaagaaaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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