KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111790923
Entry
111790923         CDS       T05351                                 
Name
(RefSeq) DNA topoisomerase 2 isoform X1
  KO
K03164  DNA topoisomerase II [EC:5.6.2.2]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpep03032]
    111790923
   03036 Chromosome and associated proteins [BR:cpep03036]
    111790923
Enzymes [BR:cpep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     111790923
DNA replication proteins [BR:cpep03032]
 Eukaryotic type
  DNA Topoisomerases
   111790923
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    111790923
  Centrosome formation proteins
   Centriole proteins
    111790923
SSDB
Motif
Pfam: DNA_topoisoIV TOPRIM_C DNA_gyraseB Toprim HATPase_c
Other DBs
NCBI-GeneID: 111790923
NCBI-ProteinID: XP_023527820
Position
LG03:5384432..5392166
AA seq 1491 aa
MAVEKKRPLQNSNAANVDSDPGGPKKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLW
IYENDKMVHRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLKVVIDAEQNFISVFNNGD
GVPVEVHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD
GRRLKKYKQVFSDNMGKKSEPIITKCKEGDNWTKVTFKPDLAKFNMTHLEDDVVALMKKR
VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDFYLKSAAAFQTEPPKRYHIRPNERWEIVV
TLSEGQFQQVSFVNGIATIKGGTHVDYITNQIANYVMTVVNKKNKNANVKAHNVKSYLWV
FINALIDNPAFDSQTKETLTIRQSSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK
DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD
GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHRNGTVLSFYTMPEYEAWKDNLR
GNASGWSIKYYKGLGTSTSKEGREYFEQLAKHKKDFIWQDEHDGEAIELAFSKKKIEERK
NWLRQFEAGTHLDQSEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
HGGKDHASSRYIYTKLSNATRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
GIGTGWSSYIPNYNPRDIIRNVRRMLNGEAMLPMDPWYRGFSGTIEKTATKEGGTSYTVS
GIIEEVSDTTLRITELPVRRWTNDYKDFLDSVTRVSTKNDKDKEKAAKDPFIEQADHHSD
DKTVSIDVHLTEENMILAMQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
FPLRLEFFEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGF
TPFPKKTKSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCN
ERDKFKGEVEELRKATPKSLWLKDLDYLEKELDEMDRNDAQADEVRKQQRIKNNDVKPKI
SRNAPKAPRNSKKTSNSETITESMDITTSSSTTTEVANNPVVKPKGKAAPRKAPAKKQGK
AAVLDDDDDDEVLELKDRLAAYKLESSPEPSEVSAMETEVPKVQAAAKKKEPSKRAAAKK
KTTAKSAQISDDSDNGDFEIKEIAPPAAKKGGGRKAAANAKTTKTTKKQEPVARLGQKLI
TQMLEPTENSGISPEKKVRKIRESPFNKKSGSMLGRKIGEEEEEVEAGNEGKMMGSASSE
TTDEEVGRVPLARGRSQRTNRTQVRYVVSDSDSEPVYEDSDFDEEADLDED
NT seq 4476 nt   +upstreamnt  +downstreamnt
atggccgtggagaagaagcgcccattgcagaacagcaacgccgccaatgtcgactccgat
ccgggggggccaaagaaaacaatcgaagaaatgtaccagaagaagactcagctagagcac
atcctcctcagacccgatacctatgtcggatcaatcgaaaagcacacccagaatctctgg
atttacgagaacgacaagatggtccaccgatccgtcacatatgtgcctggtctttacaag
atctttgatgaaattttggtcaatgctgcagataataagcagagagacccctcgatggac
tcgctcaaggttgtaattgacgctgagcagaattttatcagtgtgttcaacaatggagat
ggagttccggttgaagttcatcaggaagaaaaggtttatgtgcctgagttgatcttcgga
catctgttgactagtagtaactatgatgatactgagaagaaaaccactggtggacgcaac
ggctacggtgcgaaacttacgaatattttttctactgaatttgtgatcgagacggcagat
ggaagacgtctgaagaagtataagcaggtattctctgataacatggggaaaaaatctgag
ccgatcataacaaagtgcaaggagggtgataattggaccaaggtgacttttaagccagac
ttggctaagttcaacatgactcatcttgaagatgacgttgttgcactgatgaaaaagaga
gtgctggatttggccggatgcctcggtaaaaccgtgaaagttgagctaaatggacaaagg
gtccctgttaaatcgtttcaagattatgtagacttctatctcaaatcggcagccgcattc
cagacggaacctccaaaaaggtatcacattcggcctaatgagagatgggaaatcgtggtg
accttaagtgagggccagttccagcaggtcagctttgtgaacgggattgcaactatcaag
ggtgggactcatgtcgattacattactaatcaaatagcaaattatgttatgactgttgta
aataagaagaacaaaaatgctaacgtgaaggcccacaacgtgaagagctatttgtgggtt
tttatcaacgctctcattgataatcctgccttcgactcccaaaccaaggaaaccttgaca
attcgtcaaagcagtttcggctctgcatgcgaacttacgccagactttttgaagaacgtg
gccacgaaatctggcattatggatagcgttctctcgtgggttaatttcaagcaaagcaaa
gacctgaagaaaacggatggagcaaaaacagaaaagattagtggtatagaaaagttggag
gatgccaattgcgctggagggaagaattcggaaaaatgtaccttaattttgacagaagga
gattcagccaaggcccttgcaatggctggtctcggtgtagtaggtcgagatttttatggc
gtattcccactgagaggtaaattgctcaatgtgagggaagcaagcagtaaacagatcact
gagaataaagaaatccaatacatcaagcaaattcttggacttcagcaagggaaggaatac
aacaatgctaaggctttgagatatggtcatttgatgattatgaccgatcaggatcacgat
ggttcgcacattaaagggctcttgatcaactttattcattctttctggccttccctctta
agagtgccgtcgtttttggttgaattcataacgcctattgtcaaggctactcataggaat
ggaactgttttatcattctataccatgcccgagtacgaggcttggaaagataacttaagg
ggcaatgcaagtggctggtcaatcaagtactataaggggttgggaacaagcacatctaaa
gaaggaagagagtacttcgaacagctggcaaagcacaagaaagattttatttggcaagat
gaacatgacggggaggcgattgagcttgctttcagtaagaagaagattgaagagaggaag
aattggctccgtcaatttgaggctggtacccatctagatcagtcagaaaaattgatcaaa
tatagcgacttcgtcaacaaggagcttatattattttcaatggctgatttacaaaggtct
attccctcaatggttgatggccttaaacctggccaaaggaagatccttttctgttctttc
aagagaaactttatcaaagaggcaaaggtttctcaattttccggttatgtatctgagcat
tctgcttatcatcacggtgagcagagtcttgctagtaccatcattggaatggcacaggac
tttgtcggcagcaacaacattaatcttcttctaccaaatggacagtttggcacacgaaac
catggaggcaaagatcatgcaagttctaggtacatttacactaaactttcaaatgctaca
cgattccttttcccgaaagacgacgacaaacttcttaactacttaaatgaagacggccag
tcgattgaaccaacctggtatatgcctatcataccaaccgttcttgtcaacggaagtgag
ggaataggaactggttggagttcgtacattccaaattataatcctagagacatcattaga
aatgtaagacgcatgttgaatggtgaagcgatgttgccaatggatccctggtatagaggt
ttttcaggaactatagagaaaactgccactaaagaaggaggtactagttacactgttagt
ggaattattgaggaagtcagcgacacgacgttaagaataaccgagttgccagtccgccga
tggactaatgattacaaggactttcttgactctgtaacaagagtttcaacaaagaatgac
aaagataaagaaaaagcagcgaaggatccttttattgagcaagctgaccaccacagcgat
gacaaaactgtttccattgatgttcacttgacggaggaaaacatgatactggccatgcag
gaaggtttgaagaagaaattcaaattaactacaactgttagcactagcaacatgcatctg
tttgatgcaaatggcgtgattaagaaatatgacacaccagaacaaattcttgaggagttt
ttccctcttagacttgaattctttgagaaaagaaagagaaatcttttggaaaaccttgaa
acggagttgctcaaactggaaaacaaggtgaggtttatccttgctgttgtgaatggagag
ataatagtaagcaatagaagaagagtagatttgttccatgagcttcaagagaaaggcttt
acaccctttcctaagaagactaaatccgttgagccggaggttgccggggcatcaaacgaa
acagatgaggcagaggagagtccggaagtagtaaaaggggaacgagtcagtgattacgag
tatctactcgctctggcaatcggaaccttgaccatcgagaaggttcaggagctatgtaat
gagagagacaagttcaaaggggaagtggaagagctgaggaaggcaaccccgaagtctttg
tggctgaaagatcttgattatctcgagaaggaacttgatgagatggatagaaatgatgct
caggcagatgaggtaagaaaacagcagagaataaaaaataacgatgtaaagccaaaaatc
tctagaaatgcaccaaaagccccacgcaacagtaagaagaccagcaattcagaaaccatc
acggaaagtatggacataacaacatctagttctacaacaacggaagttgcaaataacccg
gtggtgaagcccaaaggcaaagcagctccaagaaaagctcctgctaaaaagcagggtaaa
gctgcagttcttgacgacgatgacgacgacgaagtcctcgagcttaaagatcgtcttgct
gcctacaaacttgaatcatctcctgaaccatcagaagtttcagccatggaaactgaagtg
ccgaaagtacaagcggcggccaagaagaaagaacccagcaagagagcagctgccaagaag
aaaactactgcaaagtctgctcagatttccgatgacagcgacaacggggacttcgaaata
aaggagatagcccctccagcagccaagaagggaggaggaagaaaggcagctgcaaatgcc
aaaacaaccaaaacaaccaagaagcaagagccggtggcgaggttgggtcagaaactgata
actcagatgctggagccaactgagaactccggcatctcaccggagaagaaagtgaggaag
ataagagaatcacctttcaacaagaaaagtggctctatgttgggaagaaaaattggggaa
gaggaagaggaagtagaagctggaaatgaaggaaagatgatgggttctgcttcttctgag
actactgatgaagaagtcggccgagttccgctggcaagaggaagatcacagaggacaaac
agaactcaggtcagatatgtggttagtgattcagatagcgaaccagtttatgaggattcc
gactttgatgaagaagccgacttggatgaagattga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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