KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111791323
Entry
111791323         CDS       T05351                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013  Nucleocytoplasmic transport
cpep04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111791323
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111791323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111791323
   04131 Membrane trafficking [BR:cpep04131]
    111791323
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111791323
Membrane trafficking [BR:cpep04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111791323
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111791323
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111791323
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MYRF_ICA
Other DBs
NCBI-GeneID: 111791323
NCBI-ProteinID: XP_023528381
Position
LG03:complement(9073062..9076165)
AA seq 301 aa
MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS
GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgcccaaaagattgaaactggtcaccaagacaccatccatgatgttgcaatggat
tattacggtaagcgtgttgcatcagcttcatctgaccagaccatcaagatcactggtgta
agcaactcagccactcagcatcttgcaacgctgactggtcacctaggacctgtatggcag
gttgcctgggcgcacccgaaatttggttccttactagcttcatgttcttatgatggtcgt
gtcatcttatggaaggaaggcaatcaaaatgagtggtcacaagcccatattttcgatgat
cataaatcatctgttaactcaattgcttgggcccctcatgaagtggggctttgtttggcg
tgtggttcatctgatggcaatatctctgtattcactgcaagagcagacggtggttgggac
acttctaggatcgatcaagctcacccagtgggagtcacatctgtttcatgggctccatct
actgcaccaggtgcccttgtcggctctgctttacttgatcccgttcagaagctatgttca
ggcggttgcgacaatacggtgaaggtatggaaactctataatggggtttggaagatggat
tgctttccagctcttcaaatgcataccgactgggttagagatgtttcatgggctcctaac
ctcggtctgccgaaatcaacaattgcaagtgcgtcacaagacgggaaagttgttatctgg
actgtagtcagagaaggagatcaatgggaaggtaaggttctaaaggacttcaaaacccct
gtttggagggtatcatggtcgttaacaggcaacatcctggccgtggctgatggaaataac
aatgtttctttatggaaggaagccgtggatggcgattggcagcaggtttcaactgttgag
ccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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