KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111793483
Entry
111793483         CDS       T05351                                 
Name
(RefSeq) ras-related protein RABF1-like
  KO
K07889  Ras-related protein Rab-5C
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144  Endocytosis
cpep04145  Phagosome
cpep04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111793483
   04145 Phagosome
    111793483
   04148 Efferocytosis
    111793483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111793483
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111793483
   04031 GTP-binding proteins [BR:cpep04031]
    111793483
Membrane trafficking [BR:cpep04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111793483
 Endosome - Lysosome transport
    111793483
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111793483
  Exosomal proteins of other body fluids (saliva and urine)
   111793483
  Exosomal proteins of colorectal cancer cells
   111793483
  Exosomal proteins of bladder cancer cells
   111793483
GTP-binding proteins [BR:cpep04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111793483
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase AAA_7 FeoB_N AAA_16
Other DBs
NCBI-GeneID: 111793483
NCBI-ProteinID: XP_023531159
Position
LG01:complement(18929691..18934396)
AA seq 199 aa
MGCSSSVPDRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSIQDGTEYAEKNGMFFIETSAKTAD
NINELFEEIAKRLPRPTSS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctctgtcccagacagagcttctgggccatcgggtggggttaatcca
gagaatagtgcagctgattcaaagaatttgcgcgtcaagcttgtcctgctgggtgattct
ggcgttggtaaaagctgtattgttcttcgctttgttcgtggtcagtttgatccaacatct
aaggtaactgttggggcatcattcctgtcacaaacgattgctttacaggattctacaaca
gtgaagtttgaaatatgggacaccgctgggcaagagaggtatgctgcattagctccactt
tactatcgaggtgctgcagttgcagttatcgtatatgatataacaagctctgattccttt
gccaaagctcaatattgggttaaggagctgcaaaagcatggcagccctgatatcattttg
gcattggtcggtaacaaagctgatctccaagagaaaaggaaagtatccattcaggatggg
actgagtatgcagagaagaatggaatgttctttattgagacatctgctaagactgcagat
aatataaatgagctgtttgaggagattgcgaagcgattgccacgacccacttcatcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system