KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111793542
Entry
111793542         CDS       T05351                                 
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111793542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpep03009]
    111793542
Ribosome biogenesis [BR:cpep03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    111793542
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 SRPRB
Other DBs
NCBI-GeneID: 111793542
NCBI-ProteinID: XP_023531237
Position
LG04:complement(8738339..8742207)
AA seq 1030 aa
MGDLETQRIRNICILAHVDHGKTTLADHLIASSGGGLIHPKMAGRLRFMDYLDEEQRRAI
TMKSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSAYKSEKYLSDVDSI
LASSTGEVNDENLELIEDDEEDTFQPQKGNVVFVCALDGWGFSVNEFAEFYASKLGANVS
ALKKALWGPRYFNAKTKMIVGKKALAGGSKARPMFVQFVLERIWEVYGAALETDGNKEVL
QKVNSTFNLNIPARELSNKDPKVVLNAIMSRWLPLSNAILSMVVNCMPDPIAAQSFRISR
LLPKRDVIDAEVDVNVLSEADLVKKSIETCDTRPEAPFVAFVSKMFAVPVKMLPRRDDHG
GTTNISSDDGGDGESDECFLAFARIFSGVLYSGQRVFVLSALYDPTKGESMQKHIQEVEL
HSLYLMMGQGLKPVTSVKAGNLLAIRGLSHHILKSATLSSTRNCWPFSSMAFQVAPTLRV
ALEPSDPGDIGALLKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKDRFAR
VSLEVSPPLVSYKETIEGEASSVSDYFKVLSESTECVIKKTPNGRCVVRVQVLKLPLALA
KVLDENSGVLGDIIGVKLGQSYKNLETKRSSLRENENPAETLKKLISDAVCSNVSSKDDK
HNAQWSKLLRRIWALGPQQIGPNILINPDPKVNDPDCSVLIRGSSHASQRLGFVDGSSND
DLDAETSSVSDVASVASSEGAQTLSMEAASLENSVLSGFQLATSAGPLCDEPLWGLAFIV
EASISSLPVNSDELEPSFQSENNAIFSGQVMAAVKDACRAAVLQKKPRLVEAMYFCELNT
PTEYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASAL
LVLSHWEELCEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDTVRRRKGLPVEDKVVQHA
TKQRTRARKV
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgggtgatctggaaactcaaagaattagaaacatatgtatattagcacatgtcgaccat
ggcaaaacgacgcttgccgaccatcttattgcctcctcagggggtggtttgatccacccg
aagatggcaggccgcctccgtttcatggattatcttgatgaggaacaaaggagggcgatt
actatgaagagctcttcgattggtttacggtacaaggaatactccataaacctcattgat
tcgcctggccatatggatttttgcagtgaagtgtcgactgctgctagattgagtgatggg
gcattggttttagttgatgctgtggagggtgtgcacattcaaacccatgctgttttgcga
caggcttggattgagaagcttacgccatgtttggttcttaataaaatcgatagattgata
tgtgagttgaagttgagtcctatggaggcatatactcgtttgttgaggattgttcatgaa
gttaatgggataatgagtgcgtacaagtctgagaaatatttgtctgatgtggattcaata
cttgcaagctctacaggtgaggtaaatgatgagaaccttgagttaattgaggatgacgag
gaagatacatttcaaccccagaaagggaatgttgtgtttgtgtgtgcgttagatgggtgg
ggatttagcgttaatgagttcgctgagttttatgcttcaaagcttggggcaaatgtatct
gcattgaagaaggccttgtggggtcctcggtattttaatgccaagacgaagatgattgtt
ggaaagaaggccttggcgggaggaagtaaagctcgacctatgtttgttcaatttgtgctt
gaaagaatttgggaagtttatggggctgctctagaaactgatgggaataaggaggtgctt
caaaaggttaatagcacatttaatttgaatataccagctcgagaactttctaacaaggat
ccaaaggtggttcttaatgctattatgagtcgttggcttcctctttcaaatgcaatatta
tcaatggttgttaactgtatgcctgacccaattgctgcacaatcatttcgaatatcacgg
ttgcttccaaagagggatgtcattgatgctgaagtcgatgtcaatgtgctatccgaggca
gatcttgtcaagaaatccattgaaacttgtgatacgaggcctgaggctccatttgttgct
tttgtgtccaagatgtttgcagtgccagttaaaatgcttccaaggagggacgatcatggc
gggactactaatatttcatctgatgatggtggcgatggtgaatcagacgagtgtttcctc
gcatttgcaaggatatttagtggggttctttattctggacagagagtgttcgtgctttca
gctttatatgacccaacgaaaggggaatcgatgcaaaagcacattcaggaggttgagctg
cattcactttatctaatgatgggccaaggcttgaaaccagtgacctctgtaaaggcagga
aaccttttagcaattcgtggtcttagccatcacatactgaaaagtgcaactctttcatcc
acaagaaattgctggcctttctcaagtatggcattccaagttgcgccaactctgagggtt
gcactcgagccatctgatcctggagacataggtgccttattgaaaggcttaaggctttta
aatcgagcagacccttttgtagaggtaactgtttcatctcgaggagaacatgtacttgct
gcagctggagaagtccatcttgagagatgcataaaggatttgaaggataggtttgccagg
gtaagcttggaggtctctccacctcttgtatcttataaagaaacaattgaaggcgaggca
tctagtgtgtcggattattttaaagtgttatctgaaagtacagagtgtgtcattaagaaa
accccaaatggtagatgtgttgttagagtgcaggtactaaaacttccacttgctctagct
aaagtacttgatgaaaattctggtgttctgggtgatattattggcgtcaagttggggcaa
agctataaaaacttggaaacaaagagatcgagtttgagggaaaatgagaatccagcagaa
acattaaagaaactcatatcggatgcagtgtgcagcaatgtatcgtcgaaggatgacaaa
cataatgcacagtggtcaaagcttcttaggcgaatttgggcacttggaccacagcagatt
ggtcccaacattctgattaacccagatcctaaagtaaatgatcctgattgctctgttctt
attcggggttcatctcatgcatcacagagactgggtttcgtggatggttcctcaaatgac
gatttggatgctgaaacatcatcggtaagtgatgttgcttctgtagcatcatcagaagga
gctcagacattaagcatggaagcagcatctcttgagaacagtgttctatctgggtttcag
cttgctacatcagctgggccgttatgtgatgaacctctgtgggggttggcgtttattgtt
gaggcttctatttcttcattgcctgtgaattcagacgagttggaaccttcctttcaatca
gagaataatgctatcttttctgggcaagttatggcagctgtaaaggatgcctgtagagca
gctgtactgcaaaagaaacctcggcttgtcgaagccatgtacttctgtgaattgaacact
cccaccgagtatttgggtccaatgtatgctgtacttgctcgaaggcgagcccgagttttg
aaagaagaaatgcaggaaggttcacctttgtttactgtgcacgcatatgtgccagtttca
gagagctttggttttgcagatgagttaaggaggtggacttctggagctgcaagtgctctt
ctagtgcttagccactgggaagaactatgtgaagatccgttctttgtcccgaagacggaa
gaagaaattgaagagtttggagatggttctagcgtgcttcccaacacagccagaaagctc
attgatactgtaagacggcgtaagggtcttcctgtggaagataaagttgtgcagcatgca
acaaagcagagaacacgtgctcgaaaagtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system