KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111795736
Entry
111795736         CDS       T05351                                 
Name
(RefSeq) DNA polymerase alpha catalytic subunit
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030  DNA replication
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111795736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpep03032]
    111795736
Enzymes [BR:cpep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111795736
DNA replication proteins [BR:cpep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    111795736
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_2 DUF1744 BRF1
Other DBs
NCBI-GeneID: 111795736
NCBI-ProteinID: XP_023534068
Position
LG05:7937086..7949144
AA seq 1548 aa
MADEQPSAANRRRSRGSEATARLQALERLKAIRTGGRRSEAGGFQVKLENPIYDTIPEDE
YDALVAKRREEARGFIVDDDGLGYGDEGEEEDWSKAGICFSDESDGEPEKPKKRKSEKKE
AQPKKPSSTSLSAAAAMMGKQKLSSMFTSSIFRKTGKDDKAKGLACDSIVDDVIAEFAPD
ETDRERRRKGQIGATPISKTFAPVPSMKCEGVIAQSLNLTGGSELVKGTVNGNSGMTKDF
TNSDLESVRADIEIQGNGETKKFDSKDDLDSEINLVSVGQSHNPSIKEDVIEDNMPIVVE
TKSESLVKKEPVCTLNATISDVKDPALSATAGWQAVRSEGSGNADSAADTSEDKSHFDID
ADGSLPFYMVDAHEELFGANMGTVYLFGKVKAGDTYHSCCVVVKNVQRCVYAIPSASFLH
SDEMLKLQNDAEQSQLSPTDLRTKLQEVTAGLKNEIAQQLLDLNVPTFSMTPVKRKYAFE
RQDIPTGENYVLKINYPFKHPPLPADLKGESFCALLGTHRSALELLLIKRKIKGPSWLSI
SKFSSCHVSQRVSWCKFEVIIDSPKDVQISTSSSKTLEIPPMIVTAINIKTIINEKQNVN
EIVSASVICCQRAKIDGPMLATEWKKPGMLRHFTIIRKLDGGIFPMGFAKESTDRNSKAG
SNVLICEGNERALLNRLMIELFKLDSDVLVGHNISGFDLDVLLHRAQFCRVPSCMWSKIG
RLKRSVMPKLGKGGGIFGSGASPGVMSCIAGRLLCDTYLSSRDLLKEISYSLTELAKTQL
NKDRKEVTPHDIPRMYHASESLMNLIEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLW
GRSLQGARAQRVEYLLLHAFHAKKYIVPDKISTYVKEKKMVKKRTNHGSEEKNLDNVDLD
DANIEAPNTESGKGKKGSSYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTV
ERSPDGVIPCLPSSKVTGVLPELLKNLVQRRRMVKSWMKNASGIKLQQLDIQQQALKLTA
NSMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVQNNLNLEVIYGDTDSIMIHSGL
DDIGQVKAIAGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIE
RKGLDMVRRDWSLLSKELGDFCLSQILSGGSCEDVTESIHDSLVKIQEDMRKGQVALEKY
IITKTLTKPPEAYPDARNQPHVQVALRLKQMGYSTGCSVGDTIPYIICCEQGSTSGGSVG
IAQRARHPDELKKEDGKWMIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKF
QNKSSEVSRSDVSSSLLCSINDEERYQGCIPLTLTCPSCSGTFECPAIFSSIYKSADGKQ
EKAVDEPTSKFWNNLRCPKCPDEASAGRMTPGMISNQVKRQAERFISMYYNGLLMCEDET
CKYATRAVNLRVMGDSEKGTICPNYTHCNGRLIRKYTEVDLYKQLAYFSHTLDTIRCMEK
LEVHARVTLEKEMAKIRPIVELAASTIQSLRDRSAYGWVQLQDFVVTV
NT seq 4647 nt   +upstreamnt  +downstreamnt
atggcggacgagcagccttcagccgcaaatcgccggaggagccgaggatctgaggcaacc
gctcgccttcaggctctggaacgtctcaaagccatccgcactggcggccgtcgatcagaa
gccggtggtttccaagttaagttggagaaccctatctacgatacgattcccgaggatgag
tatgatgctcttgttgcaaagcgtcgggaagaagcccgagggtttattgttgacgacgac
ggtcttggatatggagacgaaggcgaggaagaggattggtccaaagctgggatttgtttc
tctgatgagtctgatggcgagcctgagaaacctaagaagaggaaatcagagaagaaagaa
gcgcaaccgaagaagccctcttctacttctctgtcggcggcggctgcgatgatggggaaa
cagaaactttcttcgatgttcacttcctcgatcttcaggaaaacgggtaaagatgataag
gctaaagggttggcttgtgacagtattgtcgatgatgtgattgccgaatttgcgccggat
gagactgatagagagcggcgtagaaaggggcaaatcggagctacaccaatatcgaaaaca
tttgcgcctgttccttctatgaaatgcgagggagtaattgctcagagtcttaatttaact
ggtggatctgaattggttaagggtactgtaaacgggaactctggaatgaccaaggatttc
acaaacagtgatttggagtctgtgcgagctgatatagagatccagggaaatggtgaaact
aagaaatttgattcaaaggatgatttagattctgaaatcaatctggtttcagttgggcaa
tctcataatccttcgatcaaggaagatgtaattgaagataatatgccaattgtggttgaa
acgaagtcagaatctttagtgaagaaggagccggtttgtactttgaatgctacgattagc
gatgtaaaagacccagctttgagtgccactgcgggatggcaagcagtgagaagtgaaggg
agtggaaatgctgattctgctgcagatacttctgaagataaatcccattttgatattgac
gctgatggctctctgcctttctatatggttgatgcgcatgaggagctcttcggtgcaaat
atgggcaccgtatatctgtttggcaaggtcaaagctggagatacgtaccacagttgttgt
gtggtggtgaaaaacgtgcagagatgcgtatatgccattccaagtgcctcttttcttcat
tcggatgagatgttgaagcttcagaacgatgccgaacaatcccagctttctcctacagat
ctgcgtaccaagttgcaagaagtgactgcaggattaaaaaatgaaatagctcagcagttg
ctagatctcaatgttccaacatttagcatgacacccgttaagaggaaatatgcatttgag
cgtcaagacatacctacgggggaaaattatgttcttaagattaattacccattcaagcat
cccccacttcctgctgatctaaaaggagaatccttctgtgcactcttaggaacacatcgc
agtgccttggagcttcttctcattaaaaggaaaataaagggtccctcctggttgtcaatt
tcaaaattttcttcctgtcatgtttctcaacgagtgagctggtgcaagtttgaggtgata
attgactctccaaaagatgttcagatttcaacttcatcaagcaaaactttggagattcct
cctatgattgtcactgcaataaacataaagaccattattaatgaaaagcagaatgtcaat
gaaattgtgtctgcatctgttatatgctgtcaaagagcgaagattgacggtcccatgtta
gccacagaatggaaaaagcctggtatgcttagacattttactatcatccgtaagcttgat
ggaggcatatttcctatgggatttgctaaagagtccacagatagaaattcgaaggctgga
tcaaatgttttaatctgcgagggcaatgaacgagccttgttgaatcgattaatgattgaa
ttgttcaaattggatagtgatgtgctggttggacacaatatctctgggtttgacctagat
gttcttctccatcgagcccagttttgccgagtaccaagctgcatgtggtccaaaataggt
cgtcttaagcggtctgttatgcctaaacttggaaaaggagggggcatttttgggtctgga
gcaagtcccggagtcatgtcttgcattgctggtcggctcttatgtgatacgtacttgtct
tcccgtgacctattgaaagagattagttattctttgacagagctagcaaagactcaactt
aacaaggaccgcaaggaagtcactcctcacgatattccaagaatgtaccatgcatcagag
tctctcatgaacctgattgaatatggtgagacagatgcatggttgtcattggaactcatg
tttcatttaagtgttcttccccttacacgtcagttgactaatattagtggtaacctctgg
ggaagaagtctgcagggtgctagagcccagagagtagagtatctcttacttcatgcattc
catgccaaaaagtatattgtccccgacaagatttcaacttatgtgaaggaaaaaaagatg
gttaaaaagagaacgaatcatggttctgaggaaaaaaatcttgataatgttgatttagat
gatgcaaatatagaagctcccaatactgaaagtggaaaaggaaaaaagggatcctcctat
gcaggtgggctagtcttggagccaaaacgaggtttatatgataaatatatattgctcctg
gacttcaacagtctgtatccttccatcattcaggaatataatatttgcttcaccactgtt
gaaagatctccagatggtgtcattccttgtctgccgtctagtaaagtcactggagttctt
cctgagttgctaaaaaatctggttcagaggagaagaatggtgaagtcatggatgaagaat
gcatctggtatcaagctccagcaacttgacattcaacagcaggcattaaagctcactgca
aacagtatgtatggatgtcttgggttttctaattcaaggttttatgcaaaaccactggca
gagcttattacttcacaaggaagagaaatactgcagagcactgttgatcttgtacagaat
aatctgaacctagaggtaatttatggtgataccgattcaataatgattcatagtggactt
gatgatattggtcaagtgaaagcaattgcaggaaaagttatacaagaggtcaacaaaaag
tataaatgtttagaaattgatcttgatggcttgtataagagaatgctgcttctgaagaaa
aagaaatatgcagctgtgaagttgcagttcaaggatggaacgccatatgaggttattgag
cgcaagggtcttgatatggttcgtcgtgattggagcttattgtcaaaggaattaggtgat
ttctgcttgagtcaaatattgtctggagggtcatgtgaggacgtcactgaatcgatacac
gattctcttgtgaagatacaagaggatatgaggaaagggcaagttgcacttgagaaatat
atcatcacgaagacattgaccaagccacctgaagcctatcctgatgccagaaaccaacca
catgttcaagttgcactaaggttaaaacaaatgggctattcaactggctgttctgttggt
gatacgatcccatatataatttgctgtgagcagggatctacttctggtggttctgtaggc
attgctcagcgggctagacatcctgatgaattaaagaaggaagatggaaaatggatgatc
gacatcgattactacctgtcacagcagattcaccctgtggtttctcgtctatgtgcctca
atccagggcactagcccagaacgcttggctgactgtctggggcttgattcatcgaagttt
caaaacaaatcaagtgaagtttcccgaagtgatgtctcctcttcccttttgtgttccata
aacgatgaggaaaggtatcagggctgtataccactgacattaacttgccccagctgctct
ggtacttttgagtgtcctgctatcttcagttctatatacaaatcggcagatggaaagcaa
gaaaaggcagttgatgaacctacaagcaaattttggaataatttgcgttgtccgaaatgt
cctgacgaagctagtgcgggtagaatgactcctggaatgatttccaatcaggtaaaaagg
caagcagagaggttcatttcgatgtattataatggcttactgatgtgtgaggatgaaacc
tgcaaatatgccacacgtgctgtcaatcttcgagttatgggcgactctgagaaaggaacc
atctgcccaaactatacccactgcaatgggcgtctaataagaaagtacacagaagtggat
ttgtacaagcagcttgcatattttagtcacactttggataccatacgctgtatggaaaag
ttggaggttcatgcaagggtaactttagagaaagaaatggctaaaattcggccaatagta
gagttagctgcatcaacaattcaaagtcttcgagatcgcagcgcatatggttgggtgcag
ctgcaggattttgtagttacagtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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