KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111795801
Entry
111795801         CDS       T05351                                 
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    111795801
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cpep01007]
    111795801
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpep03016]
    111795801
Enzymes [BR:cpep01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     111795801
Amino acid related enzymes [BR:cpep01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   111795801
Transfer RNA biogenesis [BR:cpep03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    111795801
 Prokaryotic type
   Other AARSs
    111795801
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d Imm5
Other DBs
NCBI-GeneID: 111795801
NCBI-ProteinID: XP_023534158
Position
LG05:3391810..3402566
AA seq 603 aa
MEALKLYGAVCSQPLFKHLIRLASSSSTISALAPKSSRSALFLRRCSSAATSTAGDGKVK
LSGRSRRSSSSTTSSPSSTSDREAVRAIRLKKVEELRSKGLEPYAYTWDRTHTASQLQEL
YKHLGNGEESNSDTSSVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLINDQFDQ
LKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQRY
VDMIANPEVADTFRKRAKIISEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSIG
RDLYLRIATELHLKRMLVGGFERVYEIGRIFRNEGLSTRHNPEFTSIEIYEAYSDYQSMM
NMAEEIVTRCALAIHGKLSIDYQGVEICLERPWRRETMHNLVKEATGIDLNEFGNDLKVA
KEVTLRTIGDTLEYKDKTSIEASQSIGHLLSEIFELIVEPKLLQPTFVLDYPIEISPLAK
PHRRHAGLTERFELFICGRELANAFSELTDPIDQRGRFEEQIRQHNEKRGVAVSGTDAID
GSQKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVIAFPVLK
IQQ
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggaggccttgaagctctacggggcagtatgctcccagccattgttcaagcacctcatt
cgcttggcttcttcctcttcgacaatctccgcccttgctcccaaatcttctcgttccgcc
ctcttccttcgtcgctgttcttccgccgcaacctccactgctggtgacggaaaggtcaag
ctttccggccgtagccgccgttcttcctcctcgactacttcatctccttcttctacgtcc
gacagggaggcggttcgtgcaattcgcttaaagaaggttgaggaattgaggagcaagggg
ttggaaccttatgcatatacgtgggacaggactcatactgctagtcagctgcaagagttg
tataagcatctaggcaatggcgaagagtctaatagcgatacgagttctgtgtcaatagct
ggaaggattgtggctcgccgtgcgtttggaaagcttgcatttctgacattaagagacgat
tctggtacaattcagctttactgtgagaaggaaaggctcataaatgatcagtttgatcag
ctaaagaatcttgtcgatatcggcgatattcttggtgcacgaggttcaattaagcgaacc
gagaaaggggaactttctgtttgtgtgaattcttttgaaatcctgacgaagtcattactt
ccacttcctgacaaatatcatggtttaactgatattgataaacgctaccgccaacggtac
gtagatatgattgcgaatcctgaagtagcggatacattcaggaaaagagcaaagataata
tcagagattcgcaagactgtggaatcattaggatttgttgaggttgagactccagtcctt
cagggagcagctggaggagctgaagcaaggccttttgtcacgtaccacaattccattggg
agagatctgtatttaagaatagctactgagctccacttgaaaagaatgctagttggtggc
ttcgagagagtatatgaaattggacgcatattcagaaatgaaggactttcaactcgtcat
aatcctgagtttacatctatagagatatatgaagcatattcagattatcagagtatgatg
aacatggcagaagaaattgttacccgttgtgctcttgctattcatgggaaactttcaatt
gattaccagggagttgaaatatgccttgaaaggccttggaggagagaaacaatgcacaac
ctcgttaaagaagccactgggattgatttaaatgagtttggaaatgaccttaaagttgcc
aaagaagttactttgaggaccattggggatacccttgagtataaggacaaaacttctatt
gaagcaagtcaatcaattggtcaccttctatctgagattttcgagcttattgtagaaccg
aagctccttcaacccacttttgtgttggattacccaatcgagatatctcctctggcaaaa
cctcacagaaggcatgctgggttgacagaaaggttcgaacttttcatttgtggtcgcgag
ctggccaatgcattttctgaattgaccgatcctatcgatcagaggggtcgatttgaagag
cagattaggcaacataatgagaagcgtggtgtagctgtttctggaacagacgctatagat
ggaagtcagaaaaaagacgaggatgactcttatgaagtgacacttgatgatgactttctt
acagctctggaatatggaatgccacctgcttctggcctgggaattggaattgatagatta
gtgatgcttctgacaaattctgcaagcattcgagatgtaattgcttttccagtgcttaaa
atccagcagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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