KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111801818
Entry
111801818         CDS       T05351                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111801818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpep03021]
    111801818
Enzymes [BR:cpep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111801818
Transcription machinery [BR:cpep03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     111801818
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 111801818
NCBI-ProteinID: XP_023541760
Position
LG09:complement(3177526..3194874)
AA seq 1158 aa
MVVKPSDDDSKNGKQVDDPNAIGSDIDKQFLGLPIKSAVDKFQLLPEFLKVRGLVRQHLD
SFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRVGEPSVTMNAVSESISPHMCRLSD
LTYAAPILVDIEYIEEHHAQKAPREKKDVVIGRMPIMLRSRCCVLYGKDEAELARLGECP
LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
IYLQLNIFTTPKIPIVVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE
QALEYLETKVKRFQFFSAPPEKEGRALGILRDVFLANVPVHKNNFLPKCIYVGVMMRRMM
DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTVDKLLGKHSRSSRFD
FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLIYLCYCLGVE
DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH
CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLREGLIEYLDVNEENNA
LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ
LKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDYSGNMQILDDDGLAAPGEIIRPN
DVYVNKQTPMITKGTPLPGIPDSAYRPCKQIFKGSEGEPTVIDRVALSTDKNDCLCIKFL
IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI
ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDILYSGITGCPLQ
AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
ASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSSCKNGDNISTMKLPYACKLL
IQELQSMNIVPRLKLAEA
NT seq 3477 nt   +upstreamnt  +downstreamnt
atggtcgtgaagccgtcggacgacgattcaaagaacgggaagcaagtcgacgatcctaat
gcaatcggttcggacattgacaagcaattccttggccttcctatcaagtcagccgtcgac
aagtttcaacttcttcctgaatttttgaaggtaagaggtctggttcggcaacatttggat
tcctttaactacttcgtgaatacagaaattaaaaagatagtcaaggccaatgatcgaatt
gaatccagcaccgatccgagtatttatcttaggtttctagatgtaagagttggcgagcct
tctgtgaccatgaatgctgtcagtgaatctattagtcctcatatgtgccgcttatctgac
cttacatatgccgctccgatacttgttgatatagaatacatcgaagaacatcatgcacaa
aaagccccaagggagaagaaagacgtggtcattgggaggatgcctataatgttacgaagc
cgttgctgtgttttatatggaaaagacgaggctgaacttgcaagacttggtgagtgtcca
cttgatcctggcggctattttgtaatcaagggcactgagaaggtggttttgattcaagaa
caactttcaaagaacaggattatcattgatactgacaaaaaggggaatataaatgcatct
gttacaagcagcacagaggcaacaaaaagtaaaacagttattaaaatggaaaatgagaag
atctatctccagctcaatatatttaccacaccaaagattcccattgtggtggtcttgaag
gctatgggaatggagagtattcaagaagttgtgcaaatggttggaagagatcctcgatac
ggggccctacttcttccatcgattgaggaatgtgcgaaggaaaaaatatatacacaagaa
caagcattagagtatcttgagacaaaggtgaagaggtttcaattttttagtgctcctcca
gaaaaggaaggacgggctctagggatacttcgtgatgtttttcttgccaatgtcccagtc
cataaaaataactttcttccaaaatgcatatatgttggagtcatgatgagacggatgatg
gatgcaattttaaataaggatgctatggatgacaaggattatgtgggcaacaaacgtttg
gagctatctggtcagttgatctctttactttttgaggatttattcaagacaatggttagt
gaagtgaagaagacagttgataagcttcttggaaagcacagtaggtcaagtcggtttgac
ttctctcagcatctgaattcaaacattatttcttttgggctagaaaggaccctttcaact
ggtaattgggatgttaaaaggttcaggatgcaccggaaggggatgagtcaggttcttgct
aggttatcttttatttctactatgggtcatgtgactagagtctccccacagtttgagaag
tccaggaaagttagtggaccaagagcactacaacctagtcagtggggtatgctttgtcca
tgcgatactccagaaggtgaggcttgtggacttgtaaaaaacttggctctgatgactcat
gtaacgacagatcaggaagaaggcccattaatttatttgtgctactgtttgggtgtcgaa
gacttggagcttctttctgcagaagagctacatacaccaaattcatttcttgttattttc
aatggacgtatccttggcaaacatcggcggcctcagtactttgctactggtatgagaatg
ctgaggagagctggaaaaattggcgagtttgtcagtgtctttgtgaatgagaagcagcac
tgtgtatacattgcttctgatggaggacgagtttgtcgtccgcttgtcattgctgacaaa
ggtgtatcgaggattaaagaataccatatgaaagagttatcggatggagtccgtacattt
gatgattttttacgggaaggtttaatcgagtatcttgatgtgaacgaggagaataatgct
ttgattgctttgtatgaaggagaagctacaccagaaacaactcatattgagattgagccc
tttaccatattaggcgttgtagctgggttaattccatatcctcatcataaccaatcgcct
agaaacacttatcaatgcgctatgggaaagcaagccatgggaaacatcgcatacaatcag
ttaaaaagaatggacacgttactgtacttgctggtgtatccccagaggcccttattaaca
acgaggactattgagctggttggatatgacaagcttggagcagggcagaatgcaactgtt
gctgtcatgagttacagtggctatgatatagaggatgcaatcgtcatgaataaatcgtca
cttgatcgtggttttggtcgttgtattgtttttaagaaatattcttctgtcaatcagaag
tatgaaaacaacactgctgacaggatagtcaggccgaatagaaacgaagattattcggga
aatatgcagatattagatgatgatggacttgctgctccgggagagattattagaccaaac
gacgtttatgtcaacaaacaaacccccatgataacgaaagggacgcccttaccaggaata
ccagatagtgcgtataggccttgtaaacaaatatttaaaggttctgaaggagagcctact
gtgatcgatagagtggctctttctacagataaaaatgactgtttatgtatcaaattcttg
attcgccagacccgtagaccagagcttggtgataagttcagtagcagacatggacaaaaa
ggtgtatgtggcacaattgttcaacaagaagatttcccattttctgaacgtggaatttgt
ccagatctaattatgaatcctcatggattcccaagtcgaatgacagtggggaagatgatt
gaactcctaggaggaaaagcaggggtttcatgtggtaggtttcactatggtagtgcattt
ggagagccaagtggtcatgcagacaaagttgatgctataagcgagactcttatcaagaga
ggcttcagttacaatgggaaagacattctttactcaggtatcacaggttgcccattacaa
gcatatatatttatgggaccaatttactaccagaagttaaagcacatggtcttggacaaa
atgcatgctcgaggtagtggtccacgtgtcatgttaactagacaaccaacagaagggaga
gccaggaatggaggacttcgagttggagaaatggaacgcgattgtttgattgcgtatggt
gctagtatgctgatttttgaacgtttaatggtctcaagtgatcctttcgaagttcaggtc
tgcagagtttgtggtttgttgggatattacaaccacaagctaaaagcgggaatctgttct
tcatgtaaaaatggagataacatatccactatgaaacttccatatgcgtgcaagctctta
atccaggaacttcaatctatgaatattgttcctcgcctaaaactagccgaagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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