KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111804211
Entry
111804211         CDS       T05351                                 
Name
(RefSeq) 60S ribosomal export protein NMD3-like
  KO
K07562  60S ribosomal export protein NMD3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008  Ribosome biogenesis in eukaryotes
cpep03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111804211
   03008 Ribosome biogenesis in eukaryotes
    111804211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpep03009]
    111804211
Ribosome biogenesis [BR:cpep03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    111804211
SSDB
Motif
Pfam: NMD3 NMD3_OB NMD_SH3 DUF35_N
Other DBs
NCBI-GeneID: 111804211
NCBI-ProteinID: XP_023544705
Position
LG10:3513285..3515879
AA seq 509 aa
MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY
KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ
YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR
THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW
KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
PSVPLEELLADLDLDEGDGDGDGNDGMDE
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggctggagaagcaggattgtttgctgttcaacagaccattggcagtgtcttatgttgc
aaatgtggaattcccatggcaccaaatgctgccaatatgtgcgtcaaatgcttgtgttct
gaagttgacatcacagaaggtctacagaagcaattgactattatgcattgtccagattgc
gagagttacttgcagccaccccgaacttggcttaaagcgcaattagaatcaaaggaacta
ctgacattctgtatcaaaaggttaaaaaatttgaataaggttaaactggtacatgctgaa
tttgtttggactgaaccccattccaagagaatcaaggtcaagttgaaggttcagaaagag
gtcctacatggagcaattttggaacagtcctacgtcgccgagtatgttgtacaggatcac
ttgtgtgagtcttgtgcaagggtccaggccaaccctgaccagtgggtagcttctgttcaa
ctcaggcagcacgtgcctcaccgccgtacatttttcttcttggagcaactgatactgaag
catggtgctgctgccagtgccataaggatcaaacagatggatgaaggtattgactttttc
ttttctaataggagtcatgctgtaaagtttgtggaatttattggaaaggttgctccaatc
aggagccgcagcgataaacaactcgtttctcatgattctaagagtaacgttcacaactat
aagcacactttctctgttgaaatatcgccaatatgccgtgaggatttgatatgcttgcct
cctaaagttgctgttagtttgggcaatcttggtcctcttgtaatttgcaccaaagttaca
aatgcgattgctttacttgatccattcacattaaggtactgcttcttggatgctgatcag
tattggaggacatcctttaggtctctactcactagcaggcagcttgtggaatatgttgta
ttagatattgagaatgtttctactgaagtcaatgttgctggttccaagtatatgttggcc
tatgctcaagtagctcgcgtatcagattttggaaggaacgacacgatattctccataaga
acccatcttggtcatattttgaaccctggggattatgcccttggttatgatctttatgca
gccaatagtaatgatatggagatagaaaaatacaagggtctcgaacttccagaggcgatt
ttaatcaagaagagttatgaagaaaagcgccagaggaagcgtggaaagcctcgagcatgg
aagcttaaatcgcttgaaatggatgttgatgatagaggtagagcagatgaagataagaaa
aactcggagtatgaacagtttttgagagacttagaggagaatccagatttgaggttcaac
atatcattgtaccgaaatagagaatatcaaccatctgaaatgactgatggggaagatgga
ccttcagtaccacttgaagagttgcttgctgatcttgatttagatgaaggagatggagat
ggagacggaaacgatggcatggacgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system