KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111807520
Entry
111807520         CDS       T05351                                 
Name
(RefSeq) autophagy-related protein 8f-like
  KO
K08341  GABA(A) receptor-associated protein
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    111807520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111807520
   04121 Ubiquitin system [BR:cpep04121]
    111807520
   03029 Mitochondrial biogenesis [BR:cpep03029]
    111807520
Membrane trafficking [BR:cpep04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    111807520
Ubiquitin system [BR:cpep04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   111807520
Mitochondrial biogenesis [BR:cpep03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    111807520
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 111807520
NCBI-ProteinID: XP_023549034
Position
LG12:2987192..2991045
AA seq 117 aa
MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLYVTYSGENTFG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtcgacgagctcgttcaagcaagagcatgattttgaaaagagacacgctgaggctgcc
cggattagagagaagtacccagacagaattccagtaattgtggagaaggcagagagaagt
gatattcccaacattgacaaaaaaaagtatttagtgcctgctgacctgactgttggtcaa
ttcgtttatgttatccggaagagaataaaactgagtgcagaaaaagcaattttcatattc
gtggacaatgtgctaccgccaacagggtctctcatgtctgcaatctacgatgagaggaag
gatgaggatggctttctctatgttacgtacagtggagagaacacatttgggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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