KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111808824
Entry
111808824         CDS       T05351                                 
Name
(RefSeq) uncharacterized protein LOC111808824
  KO
K13128  zinc finger CCHC domain-containing protein 8
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111808824
Spliceosome [BR:cpep03041]
 Complex C
  Other components
   Complex C specific factors
    111808824
SSDB
Motif
Pfam: PSP zf-CCHC zf-CCHC_4
Other DBs
NCBI-GeneID: 111808824
NCBI-ProteinID: XP_023550792
Position
LG13:8319188..8325643
AA seq 602 aa
MGTEDFIALPASGDFGNENESNESLSFNETREASSQSSVLECKDNPASIEKVELADNVQL
EDMRCIPQSGLNDETQCSESDMEIEDLNNLPDLSKTRSRSENHKIRSEAEYLPVNSVDEN
ILPSREPLQQNELHLRSEDVSHAESKKNQKDLVDNSSFSKTSGLLTLATGVSIENGSAPS
HHHGGPRKIHKSDAILGVKKPRMAMDEQQPSVHIVYTSLTRDSKQKLDELLKQWSEWNAQ
RGSPSQGDKESENLESGEETFFPALRVGTKKTSAVTFWIDNQTSEQQQNFVPIDDNSVPL
YDRGFTLGLTSANDSSNAEGGQKIIDDASRCFNCGSYNHSLKDCRKPRDNAAVNNARNMY
KKHNSSGSRNSTRYYQSSRGGKYDDLRPGALDAETRQLLGLKELDPPPWLNRMRELGYPP
GYLDPEDEDQPSGITIYADEKGDEQEDGEITEPEYRKPGKKMSVEFPGINAPIPESADER
LWSAEPLSSDLPRKRSSQRLNHHIEHDGRGNDHHQQRWSRDYRDYRPPGVDSVKSPTIFT
PRYGGHESSYGSRSPRDNFSTSRSQNLGRLHSDRGRKSPRLDDDYSRYGSYSSSPFSPPR
RR
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgggaaccgaggatttcattgcattgccagcttctggtgattttggaaatgaaaatgag
agtaatgaatctcttagttttaatgaaacaagagaagcttcttctcaatcaagcgttttg
gagtgcaaggacaatcctgcaagcatagagaaggttgagcttgcagataatgtgcagttg
gaagatatgcgttgcataccccaatctggccttaatgatgaaacacaatgttctgaatca
gatatggaaattgaggatttgaataacctcccagatttaagtaagactagaagtagaagt
gagaatcataaaatacggagtgaagccgaatacctgccagtcaactctgtagatgagaat
atactaccaagcagagagcccttgcagcagaatgagcttcatttaagatccgaagatgtt
tctcatgccgaaagtaaaaaaaatcagaaggatttggttgacaattcatccttctcgaaa
actagtggtctattgactctagccactggagtttccattgagaatggttcggccccatcc
catcatcatggaggccccagaaagattcacaagagtgatgcaatattaggtgtcaaaaaa
ccaaggatggccatggatgagcaacaaccttcagtgcacatcgtgtatacttctttaaca
agagatagtaaacaaaagctggatgaattattaaagcagtggtctgagtggaatgctcaa
cgaggttctccatcacaaggtgataaagaatctgaaaacctagaatctggagaagagacc
ttctttcctgctctacgtgtcggcacaaagaagacttcagcagtgactttctggattgac
aaccaaacaagtgaacagcagcaaaattttgttcctatagatgataattcggtgccgcta
tacgatcggggattcactttgggactgacttcagccaatgattcgagtaatgcggaagga
ggtcagaagataattgatgatgctagccgttgtttcaattgtggttcttacaaccattcc
ttaaaggattgtcgaaagcctcgagataatgctgctgttaataatgctcgcaatatgtat
aaaaaacataatagctctggctcccggaattcaactcgatattatcagagttcacgtggc
gggaagtatgatgatttgaggccaggagctcttgatgctgaaacacggcaactgttaggt
ctcaaggagcttgatccacccccttggcttaacagaatgcgagagctgggctacccacct
ggatatctagatccggaagatgaggatcagccatcagggattacaatatatgctgatgag
aaaggtgacgaacaggaagatggggaaattactgagccagagtaccgtaaaccaggaaag
aaaatgagcgttgaatttcctggaatcaatgctccaatcccagaaagtgcagatgaaaga
ctttggtctgctgaacctttgagttcagatctccctagaaagcggtcaagccagcgcttg
aaccatcacatagaacatgatgggaggggaaatgatcaccatcaacaacgttggtcccgg
gactaccgagattacaggcctcccggtgttgactcggtaaaaagtcctaccatcttcact
ccaaggtatggcggtcacgaatctagttatggctcccgtagtccaagagataatttttca
acatcaaggagccaaaatttggggaggctccactcggatagaggtagaaaaagcccacgg
cttgacgatgattactcgagatatggctcttacagttcctccccgttttcgccacctaga
agacgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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