KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111811952
Entry
111811952         CDS       T05351                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040  Pentose and glucuronate interconversions
cpep01100  Metabolic pathways
Module
cpep_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111811952
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     111811952
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix ET
Other DBs
NCBI-GeneID: 111811952
NCBI-ProteinID: XP_023554796
Position
LG15:3107870..3109664
AA seq 393 aa
MAFFETLKFLIFLRLLFLNHVLTNGLTFDIVSLGAKPDGKTDASFALQTAWTKACDSSTP
ATIYVPNGTFYVKSGSFNGPCKNNAITISINGTLVASSDMTVLAHTKAWIWFKNVNGLSI
FGGVLDGQGKDLWNCKHAKENCPDGVTNLQLSNAQNVIISGLSSVNSQMYNFVVNDCQNV
KMQGIKVSDPGNSPNTDGIHVVQSSDVTILNSNIATGDDCISIASGASNLWIEGITCGPG
HGISIGSLGKEVEENGVKNVTVTSSTLTGTQNGVRIKTWGRPSKGFARDIHFKHIIMNNV
SNPIVIDQNYCPHKQNCPGQGSGVKVSEVTYEDIKGTSATEIAMNFDCSPTNPCTRLSLK
DINLTYGNQIAQASCKNAQGTASDVVKPPSCLV
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggctttttttgaaacgttaaagtttcttattttccttcggcttttgtttttgaaccat
gtcttgactaatggattaacatttgatattgttagtctcggagccaagcctgatgggaag
accgatgcctcgtttgcgcttcaaacggcatggaccaaggcctgtgactcatcaacacca
gcaactatttatgttcccaatggcacattctacgttaaaagtggtagctttaatgggcct
tgtaagaacaatgctattactattagcatcaatggtactcttgtggcttcttcagacatg
acagttctagctcatactaaagcttggatttggtttaaaaacgtaaatgggctttccatt
tttggcggtgttcttgatggacaaggaaaggacttatggaactgtaaacacgcaaaggag
aattgtcccgatggagtcacgaatcttcaactctcaaatgcacaaaacgtaatcattagt
ggattgtcttcggttaatagtcaaatgtacaactttgtggtaaatgattgccaaaacgtg
aaaatgcaaggaattaaagtctctgaccctggcaatagtccgaacacagacggcatccat
gtagtacaatcatcagacgtgaccatccttaactcaaacatcgccacaggtgatgactgc
atctcaatcgcctcaggggcctctaacttgtggatagaaggtattacatgtggacctgga
catggaatcagcattggaagcttggggaaggaggtggaagagaacggagtgaaaaatgtg
acagttacatcatctactttgacagggactcagaatggagtgaggattaagacttgggga
cgaccaagcaaagggtttgctagagatattcatttcaagcacattattatgaataatgtg
agcaaccctattgtaattgatcaaaattactgtccgcataaacaaaattgccctggtcag
ggttccggagttaaagtcagtgaagtaacatacgaagatatcaagggaacatcagccact
gaaatagcaatgaactttgattgtagtccaacaaatccttgcactcgactaagcttgaaa
gatattaatctgacttatggtaatcaaattgctcaagcttcatgcaaaaacgctcaagga
actgcctctgatgtggttaaacctcctagttgcttagtataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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