KEGG T00378: CPF

Clostridium perfringens ATCC 13124: CPF_0007

Entry

CPF_0007          CDS       T00378

Symbol

gyrA

Name

(GenBank) DNA gyrase, A subunit

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

cpf Clostridium perfringens ATCC 13124

Brite

KEGG Orthology (KO) [BR:cpf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpf03032]
    CPF_0007 (gyrA)
   03400 DNA repair and recombination proteins [BR:cpf03400]
    CPF_0007 (gyrA)
Enzymes [BR:cpf01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CPF_0007 (gyrA)
DNA replication proteins [BR:cpf03032]
Prokaryotic type
  DNA Topoisomerases
   CPF_0007 (gyrA)
DNA repair and recombination proteins [BR:cpf03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CPF_0007 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C MRP-S35 HTH_37 zf-C2H2_aberr

Other DBs

NCBI-ProteinID:

ABG84520

UniProt:

A0A0H2YV49

Position

7101..9620

AA seq 839 aa
MSLNEGKVIPIDINKEMKKCYIDYAMSVIVGRALPDVRDGLKPVHRRILYSMQELGLYPE
RGYRKCARIVGEVLGKYHPHGDSSVYDALVRMAQDFSLRYMLVDGHGNFGSVDGDSAAAM
RYTEAKMNKIASEMLRDINKNTVDFIPNFDGEEKEPVVLPSRYPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGTIALIDNPELTSLELMTYIKGPDFPTAGIIMGKSGIRAAYETGKGRI
VVRAKAEIEEENGRHKIIVTELPYQVNKAKLIEYIADLVKDKKITGISDLRDESDREGMR
MVIELKRDANPNVTLNLLYKHTKMQDTFGVIMLALVDNQPQILNLKQVLVHYINFQKDVI
TRRTQFELNKAKERAHILEGLIIALDNIDDVINIIRSSKTSEIAKNTLIERFSLSEKQAA
AILEMRLRRLTGLERDKIENEYNELMKLIDYLNAILASEERLLEVIKEELLEIKAKYSDE
RRTQIEKQENEIDIEDLIQEEDVVITLTHTGYIKRISSDVYSAQKRGGKGIQAMTTKEDD
FVENVLVTSTHSNLLFFTTKGKVYKIKAYEVPDAGRTAKGTNLVNILPLEADEKIQTVLS
FKDVQEDGYLFMGTKLGIVKKTPLKDFKNIRKNGLIALNLREGDELLRAKITYGDADIIF
VTQDGNAIRFNETDVRPMGRTASGVKAISLREGDVAVCMDIAVEDEKLLVVSENGYGKRT
NLDEYKVQNRGGIGLITYKVSDKTGKVVGATVCKEDDELMLINNQGVAIRINVSDISVTS
RSAMGVKLMRTLEDEAVVTIAKISGDTNEEEEEMTLLDESEDTNIIVEEVATEVKDEEN

NT seq 2520 nt +upstreamnt +downstreamnt
atgagcttaaatgagggaaaagtaatacccatagatataaataaagaaatgaaaaagtgc
tacatagattatgctatgagcgttattgttggtagagcattaccagatgttagagatggt
ttaaaaccagttcacagaagaattttatattcaatgcaagaattaggactatatcctgaa
agaggatatagaaaatgtgccagaatagttggggaagttttaggtaaataccacccacat
ggtgattcatcagtttatgatgcattagttagaatggcacaggatttctctttaagatat
atgcttgttgacggacatggtaactttggttctgttgatggagactcagcagcggcaatg
agatatacagaagctaaaatgaataaaatagcttctgaaatgcttagagatattaataaa
aatacagttgattttattccaaactttgatggtgaggaaaaagaaccagttgtattacct
tcaagatatcctaaccttttagttaatggttcatcagggatagctgttggtatggctact
aatataccaccacataacttaggtgaggtaattgatggaactatagctcttatagacaat
ccagaattaacaagcttagaattaatgacatacattaaaggaccagatttccctacagca
ggaataataatgggtaaatcaggaataagagctgcttatgaaactggaaaaggtagaata
gtagtaagagctaaagctgaaattgaagaggaaaatggaagacataaaataatagtaact
gaacttccataccaagttaataaggctaagcttatagaatatattgcagatcttgttaag
gacaaaaaaattactggaatatcagatttaagagatgaatctgatagagaaggtatgaga
atggttatagaacttaagagagatgcaaatccaaatgttacattaaaccttttatataaa
cacacaaaaatgcaagacacatttggagttataatgcttgctttagttgataatcaacca
caaatattaaacttaaaacaagttttagttcactatataaacttccaaaaggatgttata
actagaagaactcaatttgagcttaataaagctaaagagagagcgcacatattagaagga
ttaataatagcccttgataatattgatgatgttataaatataataagaagttctaagact
tcagaaatagctaaaaacacacttattgaaagatttagtttaagtgaaaagcaagctgct
gcaatcttagaaatgagacttagaagacttactggtcttgaaagagataagattgaaaat
gagtataatgagcttatgaagttaatagattacttaaatgcaatcttagctagtgaggaa
agattattagaggttataaaagaagagcttctagaaataaaagctaagtactcagatgaa
agaagaacacaaatagaaaaacaagaaaatgaaatagatatagaagacttaatacaagaa
gaggatgttgtaataactcttactcatactggatatattaagagaatatcttcagatgtt
tactcagctcaaaagagaggtggtaagggaatacaagcaatgacaacaaaagaagatgac
tttgttgaaaatgtacttgtaacatcaacacactcaaacttattattctttacaactaag
ggtaaggtttataagataaaagcttatgaagtaccagacgcaggaagaactgctaaggga
acaaatcttgtaaatatattaccattagaagcagatgaaaaaatacaaactgttctttca
tttaaggatgttcaagaagatggatacttatttatgggaactaaactaggaatagttaag
aaaacaccattaaaagacttcaagaacataagaaagaatggattaatagcattaaacctt
agagaaggtgacgagcttctaagagctaaaataacatatggagacgcagatattatattt
gtaactcaagacggtaatgctataagatttaatgaaacagatgttagacctatgggtaga
actgcatctggagttaaagctataagcttaagagaaggcgacgttgctgtttgtatggat
atagctgtagaagacgaaaaattactagttgtcagtgaaaatggttatggtaagagaact
aacctagatgaatataaagttcaaaatagaggtggaataggtcttataacatataaagta
tctgataagactggtaaagtagttggtgctactgtatgtaaagaagatgatgagcttatg
cttataaataaccaaggggtagctataagaataaatgtaagtgatatttcagttacaagt
agatctgcaatgggagttaaacttatgaggactctagaagatgaagctgttgtaactatt
gctaaaatctctggagatactaatgaagaggaagaagaaatgactttattagatgaatca
gaagatacaaatataattgtagaagaagtagctactgaagttaaggatgaagaaaactaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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