KEGG   Clostridium perfringens ATCC 13124: CPF_0357
Entry
CPF_0357          CDS       T00378                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cpf  Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:cpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpf03009]
    CPF_0357 (rumA)
Enzymes [BR:cpf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     CPF_0357 (rumA)
Ribosome biogenesis [BR:cpf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CPF_0357 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Cons_hypoth95 Met_10 Methyltransf_25 PrmA MTS Methyltransf_11 Methyltransf_15 UPF0020 PCMT Methyltransf_4 Methyltransf_12 Ubie_methyltran TPMT Lipoprotein_9 N6_N4_Mtase RrnaAD PDGF Methyltransf_23
Other DBs
NCBI-ProteinID: ABG84618
UniProt: A0A0H2YVC9
Position
427075..428442
AA seq 455 aa
MVEKNKEYIFDIISQGYEGEGIAKIDNKYPIFIEGALKGEKVKVRIVKVNKNFAYGKLME
VLEASEERVNPPCAIYKRCGGCKLQHASYKAQLDFKWDRVKDCVSKIGKLDPSIVKYPLG
MEEPWRYRNKVQLPIGLINGEVKIGFFAPRSHDIIDMESCLIQDEIGDKVVKLTREWIEK
FNIRPYNVDGEYDEKGIVRHIMIRRGFTTNEVMVVLVTNGEKLPHKEEFVDLMVKNIPGI
KSVIQNINSKKTNVILGLESKTLWGEDTISDYIGDFRFNISPLSFFQVNPTQTEVLYGKA
LEYANLTGNEEVFDAYCGTGTITLFLSQKAKKVYGVEIIPQAIDNAWINAKENKVENVEF
FVGESEVVIPDLINKGVKADVVVVDPPRKGCDKKLLDAITNINAKKIVYVSCDPSTLGRD
LAILEENGYKTLEVQPVDMFPNTSHVENVAKLIKK
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggttgaaaagaataaagaatatatttttgatataatctctcaaggatatgagggtgaa
ggaatagctaaaattgataataaatacccaattttcattgagggagctttaaagggcgaa
aaagttaaagtaagaatagttaaggttaataaaaattttgcctatggaaaacttatggaa
gtattagaagcttcagaggaaagagttaatcccccttgtgctatttataaaagatgtggt
ggatgtaaacttcagcacgcttcttacaaggcacaattagattttaaatgggatagagtt
aaggactgtgttagcaagattggaaagttagatcctagcatagttaaatatcctttagga
atggaagagccttggagatatagaaataaggttcagttaccaatagggttaattaatgga
gaggttaaaataggattctttgctccaagaagtcatgatattatcgacatggaatcttgc
ttaattcaagatgaaataggagataaggttgttaaacttactagagagtggatagagaaa
tttaatataagaccatataatgtagatggtgagtatgatgaaaagggaatagtaagacac
ataatgataagaagaggttttacaactaatgaggttatggttgtcttagttacaaatgga
gaaaaacttcctcataaagaagagtttgtagacttaatggttaaaaatattcctggaata
aagagtgttatacaaaatataaactcaaagaaaactaatgtaatattaggtttagaaagt
aaaactctatggggagaagatacaatatcagattacataggagactttagattcaacata
tctccattatcattcttccaagtaaatcctactcaaacagaggttttatatggtaaggct
ttagaatatgcaaatcttacaggaaatgaagaggtatttgatgcatactgtggaacagga
acaataacattattcctatcacaaaaggctaaaaaagtttatggagtagaaataattcca
caggccatagataacgcttggataaatgcaaaggaaaataaagtagagaatgtagaattc
ttcgttggagaatcagaagtggtgattccagacttaataaataagggagtaaaagctgat
gtggtagtagtagatccaccaagaaaaggatgcgataaaaaattactagatgccataaca
aatataaatgctaaaaaaatagtatatgtaagctgtgatccaagtaccttaggaagagat
ctagcaatattagaagagaatggctataaaactttagaagttcaaccagtggatatgttt
cctaatacatctcacgtagaaaatgtagctaagttaataaaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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