KEGG   Clostridium perfringens ATCC 13124: CPF_2184
Entry
CPF_2184          CDS       T00378                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
cpf  Clostridium perfringens ATCC 13124
Pathway
cpf00260  Glycine, serine and threonine metabolism
cpf00460  Cyanoamino acid metabolism
cpf00630  Glyoxylate and dicarboxylate metabolism
cpf00670  One carbon pool by folate
cpf00680  Methane metabolism
cpf01100  Metabolic pathways
cpf01110  Biosynthesis of secondary metabolites
cpf01120  Microbial metabolism in diverse environments
cpf01200  Carbon metabolism
cpf01230  Biosynthesis of amino acids
cpf01240  Biosynthesis of cofactors
Module
cpf_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:cpf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    CPF_2184 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    CPF_2184 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CPF_2184 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    CPF_2184 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    CPF_2184 (glyA)
Enzymes [BR:cpf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     CPF_2184 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP OKR_DC_1 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ABG83577
UniProt: Q0TP32
Position
complement(2424050..2425282)
AA seq 410 aa
MNFDNLEREDEQIAHLVQKEKERQENSIELIASENFVSKAVMEAMGSYLTNKYAEGYPSK
RYYGGCHVVDEVEDLARERVKKLFGAEHANVQPHSGSQANMAVYFSILEPGDTVLGMDLS
HGGHLTHGSPVNFSGRLFNFVSYGVDKETETINYETVRELALKHKPKLIVAGASAYSRII
DFKTLREIADEVGAYLMVDIAHIAGLVATGLHPSPVPYADFVTSTTHKTLRGPRGGLILC
KEKFAKALDKNIFPGIQGGPLMHIIAAKAVCFKEALEPSFKTYMEQVVKNAHVLAEALES
YGFKLVSNGTDNHLILVDLTNKDITGKDAEILLDSIGITLNKNTVPNETRSPFVTSGVRI
GTPAITTRGFKEEEMKEIASIINDAIKEKDGDLEPLKARVKALCAKYPLY
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgaattttgacaacttagaaagagaagatgagcaaattgcacatcttgttcaaaaggaa
aaggaaagacaagaaaatagtatagagcttatagcttcagaaaactttgttagcaaagct
gttatggaagctatgggatcatatttaacaaataaatatgctgagggttacccttcaaaa
agatactatggtggatgtcacgtagtagatgaggttgaagatttagcaagagaaagagta
aaaaaattatttggggctgagcatgctaatgtacaaccacattcaggatcacaagctaat
atggctgtttatttttcaatattagagccaggtgatactgtattaggaatggatttaagc
catggaggacatttaactcatggttcaccagttaacttttcaggtagattatttaatttc
gtgtcatatggtgtagataaagagacagaaacaataaattatgaaactgtaagagaatta
gctcttaaacataaacctaaattaatagttgcaggagctagtgcatattcaagaattata
gattttaaaactttaagagagatagcagatgaggtaggagcatacttaatggttgatata
gctcacattgcagggcttgtagctacaggcttacatccatcaccagttccttatgctgat
tttgttacatcaacaactcataaaactttaagaggaccaagaggtggattaatactttgt
aaagaaaaatttgcaaaagcattagataagaatatcttcccaggaatacaaggtggtcct
ttaatgcatataatagctgcaaaggctgtttgttttaaagaagcattagaaccaagtttt
aaaacatatatggagcaagttgttaaaaatgcacatgttttagcagaagctttagaatct
tatggatttaaattagtttcaaatggaactgataaccatttaatacttgttgatttaact
aataaagatataactggtaaagatgcagaaattcttttagatagcataggaataacttta
aacaaaaatactgtaccaaatgaaacaagaagtccatttgttactagtggtgttagaata
ggaactcctgctataacaactagaggatttaaagaagaagaaatgaaagaaatagcttct
ataataaatgatgctattaaagaaaaagatggagatttagagccattaaaagcaagagtt
aaagctttatgtgctaagtatcctttatattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system