KEGG T01753: CP316

Corynebacterium pseudotuberculosis 316: CP316_01215

Entry

CP316_01215       CDS       T01753

Symbol

topA

Name

(GenBank) type I DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

cpg Corynebacterium pseudotuberculosis 316

Brite

KEGG Orthology (KO) [BR:cpg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpg03032]
    CP316_01215 (topA)
   03400 DNA repair and recombination proteins [BR:cpg03400]
    CP316_01215 (topA)
Enzymes [BR:cpg01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CP316_01215 (topA)
DNA replication proteins [BR:cpg03032]
Prokaryotic type
  DNA Topoisomerases
   CP316_01215 (topA)
DNA repair and recombination proteins [BR:cpg03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CP316_01215 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim Toprim_4

Other DBs

NCBI-ProteinID:

AFB71565

Position

244489..247425

AA seq 978 aa
MAEKSGPKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRGAADVPTKYKKEPWAR
LGVNTENGFAPLYVVSPDKKKKVADLKQKLKLVDELLLATDPDREGEAIAWHLLEVLKPK
VPVKRMVFNEITKPAILAAAENTRELDANLVDAQETRRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFVSAEYWDIEAEFDTGKPDTDGNPHQFTGRLTSVDGKR
VATGRDFNDRGELKGDAVVVNKQRAEALVAELTGAPMNVVKVEEKPYTRRPYAPFMTSTL
QQEAGRKLHFTSERTMRIAQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGNDYVA
EGPRRYDRKVKNSQEAHEAIRPAGEHFATPGELHAQLDAEEFKLYELIWQRTVASQMADA
KGTSMKVTIAGKNAEFSATGRTITFPGFLRAYVEITKLSDGRDLADNAERHLPRLAEGDA
LDVNKLEVDEHSTNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVYSRGNALV
PSWVAFAVVGLLEKSFSALVDYDFTSSMEDELDDIAAGREDGTEWLTGFYFGDAAASDAT
AESIARHGGLKALVGDNLEHIDARLVNSLELFQDSEGRAVNVRVGRYGPYIERQIGISAD
GEAEYQRANLSDTTTPDELTLDVAEKLFATPQSGRELGRNPKNDRMIVAKEGRFGPYVTE
LVNDDERAQVEAKAEEIVASERKAEDEQRAAEGKRAKNWETKTAVKQKEKRIAEIVDETL
KPGTASLFKDMEPATVTLEQALQLLSLPREVGVDPSDNAPITAQNGRYGPYLKKGNDSRS
LASEEQIFTITLDEARRIYAEPKRRGRGATSQSVIKELGDNDVSGKPMSVRDGRFGPYVT
DGTTNASLRRGDDPTELTDARANELLSERRAKEAADGGAEKKATKKAAKKSTKKTTAKKA
VKKPAKTTKRVVKAGRKK

NT seq 2937 nt +upstreamnt +downstreamnt
atggctgaaaagagcggacctaagcgccttgtgatcgtcgagtctgcgacgaaggctaag
aaaattgccccttacttaggcgacgactacatagtcgaggcctccgtggggcacattcgc
gatctcccgcgaggcgctgcagatgttcccactaagtacaaaaaggagccgtgggcccgg
cttggtgtgaacacagagaacggctttgcgcctttgtatgtggttagcccggacaagaag
aagaaagtcgccgatctcaagcagaagcttaagcttgtcgacgaactcctactggccaca
gaccccgaccgcgagggggaagccatcgcgtggcacttgcttgaggttctcaagcctaaa
gtgcccgtgaagcgcatggtgttcaatgagatcactaaaccggcgattctggctgctgcg
gagaacactcgtgagctggacgcgaacctggtcgacgcacaggagactcgtcgtatcctc
gatcgtctctatggctatgaggtctcccctgtgctgtggaagaaagtcatgccgcggctt
tctgctggccgcgttcagtcggtggctacccgcgtgatcgttgagcgggagcgtgagcgt
atggcttttgtatccgccgaatactgggatattgaggcggaatttgatacgggtaagcct
gatacggatggcaatccacatcaattcactggccgtcttacctctgtcgacggcaaacgc
gtggctacgggccgcgattttaacgaccgtggcgagcttaaaggcgacgcggtggtcgtg
aataagcaacgcgctgaggcattggttgcggagctgacaggtgctccaatgaacgtggtc
aaggtagaagaaaagccttacactcgccgcccttatgcgccgtttatgacttcaactttg
cagcaagaagctggacgcaagctgcactttacctctgagcgcacgatgcgtatcgcgcaa
cgtctgtatgaaaacggccatatcacttatatgcgtacggattccacgacgctgtcggag
caaggcttaaaagcggctcgggaacaagctatttcgctttacgggaatgattatgtggca
gaagggccgcgtcgttatgaccgaaaagtaaagaactcacaggaggctcacgaggctatc
cgtccggcaggagagcattttgctacccctggagagctgcacgcccagctcgatgccgag
gaatttaaactctacgagctcatctggcagcgcaccgtagcttcccaaatggcagacgcc
aagggcacatccatgaaggtgaccattgcgggaaagaacgctgagttctccgctactgga
cgaacaatcacgttccccggcttcctgcgcgcatacgtggaaatcaccaagctttccgac
ggtcgcgaccttgccgataacgccgagcgtcacctgcctcgtctcgctgagggcgatgcc
ttagacgtgaacaagctggaagtcgacgagcactccaccaatccgcctgcgcgctataca
gaggcgtcgttggtgaaaaaaatggaggagctgggcatcggacgcccatcgacgtatgcc
tcgatcatcaagaccattcaagatcgcggatacgtttactcccgcggtaatgctctggtc
ccaagctgggtagcttttgcggttgtcggtcttttagagaagagcttctctgctcttgtc
gactacgatttcacctcgtcgatggaagatgagctggatgatatcgccgcaggacgagaa
gacggtactgagtggctcactggcttctattttggagatgccgcagcctccgatgccacc
gcagaatctattgcacgtcacggcgggcttaaagcacttgttggcgacaacctcgagcat
atcgacgcgcgtttggttaactccttagaactcttccaagactcagaaggccgtgccgtt
aatgtccgcgttgggcgatacggcccctatatcgaacggcagatcggtatcagtgctgat
ggcgaggccgagtatcagcgcgccaatctctcagacaccaccaccccagacgagctgacc
ctcgatgtggcggagaaactttttgcgactccgcaatctggccgtgagctgggtaggaac
cccaagaatgatcgcatgattgtggccaaggaagggcgttttggtccttacgtcaccgag
ttggttaacgatgatgagcgtgctcaggtggaggccaaagcagaggagatcgttgcttct
gagcgcaaagctgaggatgagcagcgtgctgccgaaggcaaacgcgccaagaactgggag
actaaaactgcagttaagcagaaagaaaagcggatcgctgagatcgtcgatgagactctg
aagccaggaaccgcctcactgttcaaggatatggagcctgccacagttacgcttgagcaa
gccctccagcttttgtccttgccacgcgaggtgggagttgatcctagcgataatgcaccc
attaccgcgcagaacggtcgctatggcccctacctgaaaaagggtaatgactcgcgctca
ctggcgagcgaagagcaaatctttactatcaccctggatgaggcccgccgaatttacgct
gaacctaaacgacgcggccgaggcgctacctcccagtctgtgattaaagaactaggcgat
aatgacgtctccggcaagccaatgtccgtgcgtgatggacgttttgggccttatgtaacc
gatggcactaccaatgcttctttgcgacgaggcgacgaccccacggagcttacagacgct
cgtgctaacgagctcctttcggaacgccgtgccaaggaggccgcggatggcggcgcagaa
aagaaagctacgaaaaaagctgcgaagaagtccaccaagaaaaccacggcgaaaaaagcc
gtgaaaaagcctgcaaagactacaaaacgagtggtcaaagctggacgtaagaaatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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