KEGG   Chlorobium phaeobacteroides DSM 266: Cpha266_0109
Entry
Cpha266_0109      CDS       T00439                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cph  Chlorobium phaeobacteroides DSM 266
Brite
KEGG Orthology (KO) [BR:cph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cph03032]
    Cpha266_0109
   03400 DNA repair and recombination proteins [BR:cph03400]
    Cpha266_0109
Enzymes [BR:cph01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Cpha266_0109
DNA replication proteins [BR:cph03032]
 Prokaryotic type
  DNA Topoisomerases
   Cpha266_0109
DNA repair and recombination proteins [BR:cph03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Cpha266_0109
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 zf-NADH-PPase Toprim_2
Other DBs
NCBI-ProteinID: ABL64179
UniProt: A1BCQ2
Position
complement(126637..129036)
AA seq 799 aa
MALKSPAASARNRTLIVVESPSKAKTINKYLGDKYTVFASVGHIKDLPKKEIGLDFDHHY
EPRYEVIAGKEKVVRQLKKLADESNEILIATDPDREGEAIAWHIANEVEFAHKPVFRVLF
NEITKTAIIAAIQQPRQIDYRLVRSQQTRQGLDKIVGYKISPFLWNVVLRGLSAGRVQSV
ALRLICEREAEINGFQIQEYWSIAADFKTDLNETFRTKLIKIKGDKPELSNQKKAETAAA
EISERLFAVKEITTRVQQRKPPFPFTTSLLQQAASNQLGFGSQKTMRIAQQLYEGIELGD
EGATGLITYMRTDSIRIGTEATAEARNYITAQFGKEYVGYGGAAKAGKNAQDAHEAIRPT
SLLRKPESVKHFLSSDQFRLYELIWRRLLTAMMAPAKIEQTRVDVEDREKEFTFRANGSR
VLFAGFMRVYDDQQELDYEAQSSTRDDVEKEQTVQLPEKLKEQDKLGLAGLDSKQSFTRP
PARYSEATLVKDLDNYGIGRPSTYASIFSTLQDRRYVELQKKKIIPTELGKDVSLILVAN
FPELFNVGFTAHMEDELDKVASGDDEYEAVLEKFYRPLETALSLRKSDPIIPQNSATETC
DKCGKGQMTVKWTASGKFLGCSRYPSCKNIKPLSSSKAKPKDTGIQCPSCKEGHMLLRDG
RLGPFLACSSYPKCNTLLNLGKQRQVEPMKIPPLLTTLVCPKCGAPMNLRSGKRGLWLGC
SKFPKCRGRLAWGTLDEEVQRHWETLMTEHQKAHPTVALTMIDGRPVPLTLSVDDIITRA
EEAGLIAAVPEEQQELTAE
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggctttaaaatccccggcagcctcggcaagaaacaggactcttattgttgtcgagtct
ccatcaaaggcaaaaacaatcaacaaataccttggggacaaatataccgttttcgcttcg
gtcgggcacatcaaggatcttccgaaaaaagagatcggacttgatttcgatcaccactat
gaaccacgatacgaagtcattgcaggaaaagaaaaagttgtccggcagctcaaaaagctt
gccgatgaatccaacgagatcctgatcgcaactgaccctgaccgcgaaggcgaagcgatt
gcctggcatattgccaacgaagtggaatttgcccataaaccggtattccgggtgctgttc
aatgaaatcaccaaaacagccattatcgccgctatccagcaacctcgccaaatcgactac
cgccttgtccgctcccagcagacgcgacagggtctcgataaaatcgtaggatacaagatc
agcccctttctatggaatgttgtcttgcgcggactctccgcaggaagagttcagtctgtc
gcattacggttgatctgtgaacgcgaagccgaaatcaatggatttcagatccaggagtac
tggagcattgccgctgactttaaaaccgatctcaacgaaaccttccggacaaagctcatt
aaaataaagggcgacaaacccgagctttccaatcagaaaaaagccgaaaccgctgcggca
gaaatcagtgaacgcctgtttgccgtaaaggagataacgacaagggtgcaacagcgaaag
cccccgtttccctttaccacctcgcttcttcagcaggcggcctcaaaccagctcgggttc
ggatcgcagaagaccatgcggattgcccagcagctctatgaagggatcgagcttggcgac
gaaggcgcaaccggtctgatcacctatatgagaaccgactcaatcagaataggaacagaa
gcgaccgccgaggcaagaaactatatcaccgctcaattcggcaaggagtacgtcggatac
ggaggcgctgcaaaagcgggcaaaaacgcgcaggacgcccatgaggcaatccgtcccacc
tcgctgttacgaaaaccggaatcggtcaaacacttcctttcaagcgatcagttccgactg
tacgaactgatctggaggcggctccttaccgccatgatggctcccgcaaaaatagaacag
acaagagtcgatgtcgaagatcgtgaaaaagagttcaccttcagagccaatggcagcagg
gtgctttttgccggattcatgcgggtttatgacgatcagcaggaactggattatgaagct
cagtcctcaacgcgcgacgatgttgaaaaagaacagactgttcagctccccgagaaactg
aaggaacaggacaagcttggtctcgcaggccttgacagcaagcagagcttcacccgacct
cccgcccgatacagcgaagcaacgctcgtcaaggatctggacaactacgggatcggacgc
ccgtcaacctatgcatcgattttttcaaccctgcaggatcgacgctatgttgagctgcaa
aagaaaaaaatcataccgacagagcttggcaaggatgtctcgcttattcttgtggcaaat
tttcccgaactgttcaatgtcggcttcacggcacatatggaggacgagcttgacaaagtt
gcttccggagacgatgagtacgaagctgtgctcgaaaaattctatcgaccgcttgaaacg
gcattgagtctgagaaaaagcgacccgatcattccccagaacagtgcgaccgagacctgc
gacaaatgcggaaagggacaaatgaccgtaaaatggacggcaagcggaaaatttctcggc
tgttcgcgctacccttcatgcaaaaacatcaagccgctgagctcatcgaaagcaaaaccg
aaagataccggaatacagtgtccctcctgtaaagagggacatatgctgctccgagacgga
agactcggcccttttcttgcctgctccagctatccgaaatgcaatacgctgctcaatctc
ggcaaacagcgccaggtcgaaccgatgaaaattcctccgctcctcaccacccttgtctgc
ccgaaatgcggagctccaatgaacctcagaagcggaaaaagaggactatggctcggatgc
tccaagttcccgaaatgccgcggacgacttgcctggggaaccctggatgaggaggttcag
cgccactgggaaaccctgatgacagagcatcaaaaagcccatccgacagttgcgctgacc
atgatagacgggcgtccggtaccgctcaccctttcggttgacgatatcatcacccgagcc
gaagaggccggacttattgccgccgtaccggaagagcagcaggagctcacagcagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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