KEGG   Corynebacterium phocae: CPHO_04400
Entry
CPHO_04400        CDS       T05007                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cpho  Corynebacterium phocae
Pathway
cpho03030  DNA replication
cpho03430  Mismatch repair
cpho03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPHO_04400
   03430 Mismatch repair
    CPHO_04400
   03440 Homologous recombination
    CPHO_04400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpho03032]
    CPHO_04400
   03400 DNA repair and recombination proteins [BR:cpho03400]
    CPHO_04400
Enzymes [BR:cpho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPHO_04400
DNA replication proteins [BR:cpho03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CPHO_04400
DNA repair and recombination proteins [BR:cpho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CPHO_04400
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: APT92258
UniProt: A0A1L7D2C4
Position
1008739..1012308
AA seq 1189 aa
MAKNSSFVHLHNHTEYSMLDGMAKVDLLAEEVSRQGMPAVAMTDHGNMYGSNAFYHAMVA
AGVKPIIGIETYMAPESRFNKKRLKWGTPDQKRDDIAGSGTYLHQTMLAENATGLHNLFK
LSSLASYEGQVGKYARMDADLVAEHADGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGRDNYFLELMDHGLDIEKRVRDELLEIGRKLDLPPLVTNDCHYVLESQARAHEAMLC
VQTGKTLMDTDRFKFDGTGYYVKTAQQMRELWDDTVPDGCDNTLWIAERVQDYGEIWEAH
PHDRMPIADVPEGHTPTSWLHHQVMEGLQDRFPGAEVPEDYVKRAEYEIEVIDMKGYPSY
FLIVAELIKHARSIGIWVGPGRGSAAGSLVAYALTITNIDPMEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMISYAANRWGEDKVAQVITFGTVKTKQAIKDSAKVNYGQPGFQMADR
INGALPKAVMAKDIPLSGIMDPEHPRYQEANEVRQLIETDPDVKRIYETARGLEGVIRQA
GVHACAVIMASVPLMNHIPMWKRPADGAYITGWDYPSCEAIGLLKMDFLGLRNLTVIGDA
MENIKRNRGKEINLEDLHPDGEGMEPVYELLGRGDTLGIFQLDSGGMQELLKRMGPTGFN
DIVASLALYRPGPMGVNAHMDYADRKNGRKPIVPIHPELEEPLKEILGETYGLIVYQEQI
MEISRKVANYTAGEADGFRKAMGKKKPEVLAKEYDKFWSGMQDNGYSKSAMDSLWGTIEP
FASYAFNKSHAAGYGLVSFWTAYLKAFFAPEYMAALLTSVGDKKDKSAIYLADCRHLGIK
VLPPSVNESELDFQAVGEDIRFGLGAIRNVGKEVVDSIVSTRKKKGLFKNFSDYLDKIEL
VACSKRVTNSLIKAGAFDDLGHPRKGLLLIHEDAVDSVQSAKKAMDKGQFDLFAGLGGGA
DDSPSPFAIEVPDEHWDKKHQLTLEREMLGLYVSAHPLDGYESALDEQTNTPLTKILAEE
VHNGQEIIIGGIISAVDRRQSKKDGSPWAILTIEDSDGAQVSIMVFNKVYALVAPQIVED
NIILAKVNVKIRDGRLSLFCSDLRTADLGPGGGAGVPLRLNMRTEQCTLENLAKLKQVLQ
NNAGDSDVHLTLVHGDQSTVMVLGEHLRVERSGNLMGDLKATMGAGILG
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggccaaaaattcctcctttgtacacctgcacaaccacactgaatactccatgctagac
ggcatggcgaaggtggatctgctcgcggaggaagtctcccggcaaggtatgcccgcagtg
gccatgaccgaccacggtaacatgtacggctccaacgccttctaccacgccatggttgcc
gcgggcgtaaaacccattatcggcattgaaacctatatggcgcccgagtcccgtttcaac
aaaaagcgcttaaagtggggaaccccggaccagaagcgagatgatattgcaggttccggc
acctacctgcaccagaccatgctggcggaaaacgccactggcctacacaacctctttaag
ctttcttccctggcctcctacgaaggccaagtgggcaagtatgcgcgcatggacgcggac
ttggtggctgagcacgcggacgggatcatcgccaccactggctgcccctccggggacgtg
caaacccgcctgcgcctagggcagtttgaccaggcactcgaggccgcagccatgtggcaa
gacatctacgggcgggataattacttccttgagctaatggaccacggcctagatattgaa
aagcgggtgcgcgacgagctgctagaaattggccggaagctggatctgccgcccctggtg
accaatgactgccactacgtcctggagtcccaggcccgcgcgcatgaggccatgttgtgt
gtgcaaactggcaaaacgctcatggacaccgaccggtttaagtttgacggtaccggctat
tacgtcaaaaccgcgcagcagatgcgcgagctgtgggatgacacggtgcccgacggatgt
gacaacaccttatggattgccgagcgcgtgcaagactacggggagatctgggaggcacac
ccgcacgaccgcatgcccatcgcggacgtcccggaggggcatacccccacctcgtggtta
caccaccaggtgatggaggggctacaagataggttcccgggcgcggaggttccggaggac
tacgtcaagcgcgctgaatatgagattgaagtcattgatatgaagggctacccgtcctac
tttctcattgtggcggagttgatcaagcacgcgcgcagcattggtatctgggtgggaccc
ggccgtggttcggctgcgggctccttggtggcttacgcgctgaccattaccaacattgac
ccgatggagcacggcctgctcttcgagcgtttcctgaaccccgaacgcccctccgcaccc
gatatcgatatcgacttcgacgaccgccggcgcggggagatgatctcctacgccgccaac
cgctggggtgaagacaaggtggcccaggtcattacctttggcacggtgaagaccaagcag
gctatcaaggactccgccaaggtcaactacggccagccgggtttccagatggcggaccgg
ataaacggcgcgctgcctaaggccgtgatggccaaagacatacctctgtccggcattatg
gacccggaacacccgcgctaccaggaagccaatgaggtccggcagctcattgagacggat
ccagacgtcaagcgaatttatgaaaccgctcggggcctggagggcgtcatccgccaggcc
ggcgtgcacgcgtgcgcggtgattatggcgtccgtgccgctgatgaaccacatccccatg
tggaagcgtcccgccgatggcgcctacatcaccggctgggactacccctcctgtgaggcc
atcgggctgctgaagatggacttcctggggctaagaaacctcaccgtcattggcgacgcc
atggaaaacatcaagcgcaaccgcggcaaagagatcaacctcgaggacttgcacccggac
ggggagggcatggagcccgtctatgagttgctgggtcgcggggataccctgggaatcttc
cagctggactccggcggcatgcaggagctgctcaagcgcatgggacccacggggttcaac
gatatcgtggcgtccttggcgctctaccgcccaggccccatgggcgtgaacgcgcacatg
gattacgcggaccgcaagaacgggcgcaagccaattgttcccattcacccggagttggaa
gagcccctcaaagaaatcttgggtgagacttacggcctgatcgtttatcaagagcagatc
atggagatctcccgtaaggtggccaactacaccgccggtgaagcagatggtttccgtaag
gccatgggtaagaaaaagcccgaagtcttggccaaggagtatgacaagttctggtcaggg
atgcaggacaatggttattccaagagcgccatggactccctctgggggaccattgagccc
tttgcttcctacgcgtttaacaagtcccacgccgccggttacgggctggtgtccttttgg
acggcctacctcaaggccttcttcgcgccggagtacatggcagcgcttttgacctccgtg
ggggataagaaggacaaatccgcgatctacctggccgactgccggcacctaggaattaag
gtactgccgccctcggtcaacgaatcagagctggatttccaggccgttggggaagacatc
cgctttggcctaggcgctatccgcaacgtgggtaaagaagtggttgattcgattgtctcc
acgcgcaagaagaagggcctattcaagaatttctccgattacctggacaaaattgagctg
gtagcctgctcgaagcgtgtgaccaactcgctgattaaggccggtgccttcgacgacctg
ggccacccgcgcaaggggctgttgctcatccacgaagacgccgtagactccgtgcagagc
gcgaagaaggccatggacaaagggcagtttgatctattcgcgggcctgggcggcggcgct
gatgactctccgtccccgtttgccattgaggtcccggatgagcattgggataaaaaacat
cagctgaccttggagcgcgagatgctggggctctatgtttccgcgcacccgctggatggg
tatgagtccgctttggatgagcaaaccaatactccgctgaccaaaatcctggcagaggaa
gtccacaatggccaggaaatcatcatcggtgggattatttctgccgtggataggcggcag
tccaaaaaggacggatcaccgtgggcaatcttgaccatcgaggattccgatggcgcccag
gtgtccatcatggttttcaacaaggtctatgccctggtcgctccccagatcgtggaagac
aatatcatcttggccaaggttaacgtgaagatccgggatggacgtttgtcgctgttttgc
tcggatctccgcactgcggacctggggccggggggcggtgccggagtgccgctacggctc
aatatgcgtaccgagcagtgcaccctggaaaatctggccaagctcaagcaggtgttacaa
aacaacgccggtgattccgatgtccacctcacgctggtgcacggagaccagtccaccgtc
atggttttgggcgagcacctccgggtggagcgtagcggcaacctcatgggggatctcaaa
gccaccatgggggcggggatcctgggctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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