KEGG   Chitinophaga pinensis: Cpin_7084
Entry
Cpin_7084         CDS       T00959                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cpi  Chitinophaga pinensis
Pathway
cpi03030  DNA replication
cpi03430  Mismatch repair
cpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cpin_7084
   03430 Mismatch repair
    Cpin_7084
   03440 Homologous recombination
    Cpin_7084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpi03032]
    Cpin_7084
   03400 DNA repair and recombination proteins [BR:cpi03400]
    Cpin_7084
Enzymes [BR:cpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cpin_7084
DNA replication proteins [BR:cpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cpin_7084
DNA repair and recombination proteins [BR:cpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cpin_7084
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 AAA_14 RuvB_N AAA_5 AAA_24 Rad17 AAA_2 AAA_30 AAA_7 DNA_pol3_delta AAA_18 AAA_19 RNA_helicase NTPase_1 nSTAND3 AAA_16 Sigma54_activ_2 Mg_chelatase AAA_33 Pribosyl_synth SRP54
Other DBs
NCBI-ProteinID: ACU64485
UniProt: A0A979GBN8
Position
8864391..8866295
AA seq 634 aa
MENFIVSARKYRPQNFSTVVGQSHITTTLKNAIRNSQLAHAFLFCGPRGVGKTTCARILA
KTINCENLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFAPQAG
KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TIQDTVDHLQEICSKEHIQAETDALHLVAQKTDGCMRDSLSTLDKIVSFTGGHLTYQNTL
EHLNILDYDYFFRVMDTVLQQDVATALLIFDEILQKGFEGDNFLNGWAEFLRNLLMSKEE
KVLHLVEVSGNLKDRYKQMAGKVSPSYLITALHLLNETEINYRMARNKRLHVEMALIKLC
FLQQAVTLVSDDQTGEVVKKKLVADGAQPQKLRSSFAQAAPEAKPAAGQAATTTSIAANE
ARLTIETPVNNTGVPPQTVTQPAQPVQQQPPVSQAPANTQHTSSYNTTTTATAPKPAQAP
TNAPKLTGLAAMKEALASKQQTQPAKAVIPMTAGALSVYWDEFIDRFRQANKMTVVSNLQ
LATIKLQSAEEICIVSRNIVQFRFMEEEKLAISAFFKDKFQNPGIVLTLQLDESQQTQDI
GPAPLSSREQFLKMTEKYPLVKELKEKLNMELDF
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggagaattttatcgtttcagcccgtaaataccgtccacagaatttttcaaccgtagtc
ggacaatcacatattacgaccacactaaaaaatgcgatccgcaacagtcagctggctcat
gccttcctgttctgcggtccgagaggtgtcggtaaaaccacctgtgcccgtattctggcc
aaaacaatcaactgtgagaacctccagcctgatggcgaagcctgtaaccaatgtcattcc
tgtacttctttcaatgagggaagttcttttaatattcacgagctggatgctgcgtccaac
aactccgtagatgacatcaggaccctggtggagcaggtacgttttgcgccgcaggccgga
aagtacaagatctatatcatagatgaggtacacatgctcagttcttccgcattcaatgcg
tttctgaaaacgctggaagaacccccttcttatgccatattcattctggcgaccacagaa
aagcacaagatccttccgacgatcctgagccgttgtcagatattcgatttcaaacgcatc
accatccaggatacggttgatcacctccaggagatctgttcaaaagagcatatccaggcg
gaaacggatgccctgcacctggtcgcgcagaaaaccgacggatgtatgcgtgactccctg
agtacactggataagattgtcagctttaccggcgggcatctgacttaccagaataccctg
gagcacctgaacattcttgattacgattatttcttccgggtaatggatacggtactgcaa
caggatgtagccactgcccttctgatatttgacgagatcctgcaaaagggtttcgagggg
gataacttcctgaacggctgggcggaatttctccgtaacctgctgatgagcaaggaagaa
aaagtattacacctggtggaagtatccggtaatctgaaagaccggtacaaacagatggcg
ggcaaggttagtccgtcgtacctgatcactgccctgcacctgctcaatgaaactgagatc
aattaccgcatggcgcgtaataaacggctgcatgtggaaatggcgctgatcaagctctgt
ttcttacaacaggcggtgacgctggtaagtgacgatcagaccggagaggtcgtaaaaaaa
aaactggtagctgatggtgctcaaccacagaaactaagatcttcctttgcccaggcggct
ccggaggcaaaaccggcagcagggcaggcagctacgacgacgtctatcgctgccaatgaa
gccagactgacgatagaaactccggtaaataacacaggcgttccgccacagacggttaca
cagccggcgcaaccggtacagcaacagccgccggtatctcaggcaccagccaatactcag
cacacctcttcttataatacaacaactacagctaccgctccgaaaccagcgcaggcgccc
accaatgcacctaaactgacgggactggcagcgatgaaggaggcattggcttccaaacag
cagacgcagccagctaaagccgtcattccgatgacggcaggcgcactgtctgtatactgg
gatgaattcatcgaccgcttccggcaggctaacaaaatgacagtcgtaagtaatcttcag
ctggcgacaattaagttgcagagtgctgaggaaatctgtattgtgagcagaaatattgtg
caattccggttcatggaagaagaaaagctggcaatttcagctttcttcaaagataaattt
cagaatcccggaattgtgctgaccttacagctggatgagtcacagcaaacacaggatatt
ggccccgcgccactttccagccgtgagcagttcctgaaaatgacggaaaaatatccgttg
gtgaaggaactgaaagagaagttgaatatggaactggatttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (56)   

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