KEGG   Chrysemys picta (western painted turtle): 101930808
Entry
101930808         CDS       T04662                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X2
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101930808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpic03021]
    101930808
   03036 Chromosome and associated proteins [BR:cpic03036]
    101930808
Transcription machinery [BR:cpic03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101930808
   Coactivators
    SAGA/TFTC/STAGA complex
     101930808
Chromosome and associated proteins [BR:cpic03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     101930808
SSDB
Motif
Pfam: TAF4 TAFH TAF Presenilin
Other DBs
NCBI-GeneID: 101930808
NCBI-ProteinID: XP_005289981
Position
15:19113357..19326520
AA seq 1021 aa
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEGPPPNSSPPSHQQQEHQ
GSLVEGGSPVQQQQQGHPAPPHFPGAGETARCPSAVGSPPPAQGAPPALSPSAAAAAGRG
ASVNSSSMQQSHGAAPCSSNPSAPAAPVPLQSAAPPPPVGAPAQPVSNHVDANAAAPAVG
SGAREVESPRHGCSPPAAAAGAVNSVLLLNSEAATAGGSPEAAGAVTPVAAAAASRELAK
AVMLSSTAAAPPPALSLLQRPALHSVPPAAHSGNGTSSSAPVVVTQSLKAGCAPAAITQV
VNHQNPAVSHSKPDSSTAQTKLLTHNPAVNALSNSTSSVPTMNLVTHPAQSSVANCAPVV
SSPITLTAISKPTVNIIGPPGSAVGVAKSATAVPVVSAVPQSLSPRPAVGTAQRIVAPQL
IVRPPQQTTIQLPPGFTIPPGMVLVRTEAGQLVMVPQQVLAQAQVQAQVQTQGQGPASIS
PRLSVPTSGPVFRLTTTQQPTSVAASAVHLGLPRQAKVVQSTATPVSATSTATLHGGSTL
SHTTVSIATTSAQNLIKATVATGTPATQQPTVIFGGQTQTPVQPQGQPRLPLPPHTTAQV
PAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSHNVKALVQDL
LDAKIDPEEFTGCLQSELKSSPQPYLVPFLKIIQSTSAQTAKRNPACQTTQIRMPVVITQ
TIRPQGTVGKAPTIQASQSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNL
NEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILEMAKKLGITDVPTEVVTFISHA
TQNRLRTVIEKVTMVTQHRMESHKDDEWYEQATDVRSQLKFFEQLEHLEKQRKDEQEREI
LLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSAGL
LTIGGEVLGMTSGSQAGFGAPSSRQYARQKITRVNLRDFIFYMEQERETSHSLLLYRALL
K
NT seq 3066 nt   +upstreamnt  +downstreamnt
atggcggcgggcgcctcggaccccctggaagagatgctgcttttctccgaagaggtggat
gagaaggcggtcagcgacctggtgggctccctggaatcacagctggccggcgggaggggc
tccgccgagggccccccccctaacagcagccccccatcccaccagcagcaagagcaccag
gggagcctggtggagggcggcagcccagtccagcaacagcagcaagggcatcctgctcct
cctcatttccccggggcaggggagaccgccaggtgtccaagtgccgtgggcagcccaccc
ccagcccagggggcacccccagccttgtccccctcagcagcggcggcggccgggagggga
gcgagtgtaaacagtagtagcatgcagcaatcacatggagcagctccttgcagcagcaac
ccgagtgcacctgctgcccctgtcccactgcaatccgctgccccacctccgcctgtcggc
gccccagcccagcctgtcagcaaccacgtggatgccaatgccgctgctcccgctgttggc
agtggtgcccgggaagtggagagtcccagacatgggtgtagtcctcctgcagcagccgct
ggtgcggtgaacagtgtgttgctgcttaactccgaggccgccactgctggagggtcgcct
gaggctgccggggctgtcactccagtagcagcagccgcagcaagtcgggaacttgcaaag
gcggtaatgctgagtagtacagctgctgctcctcctcctgctctctctcttctccagaga
cctgcactgcattctgttcctcccgcggcacacagtgggaatggcacttcctccagcgct
cctgtggttgtcactcagagtctaaaggctggttgtgccccagcagcaataacacaagtt
gtcaaccatcagaatccggctgtcagccacagcaaaccagactcctccacagcacagact
aaactcctcacacacaatcctgcagtaaatgcactcagtaactctactagttctgttcct
acaatgaaccttgtcacccatccagcccaaagttcagtagccaactgtgcccctgtagtg
tccagcccgatcaccctcactgctatatctaaacccacagttaatattatagggccacct
ggctctgctgttggtgtagccaaatcagccactgctgtacctgtcgtctctgcagtcccc
cagtcgctgtcacccaggcctgcagtgggcactgctcagagaatagttgcaccacaattg
attgttagaccgcctcagcagactacaatccagttgcctccaggttttactataccacct
ggtatggtcttggtgcgcacagaagctggacagcttgtaatggtacctcagcaggtttta
gcccaggctcaagtgcaagctcaagtacaaacacaggggcaaggtcctgccagcatctca
cccaggctttcagtgcccacaagtggtccagtttttcgtttaacaacaacccagcaacca
acttctgtagccgcatctgctgtccacctgggacttccaaggcaagccaaagttgtacag
tcaactgctacaccagttagtgctacatctactgcaaccttacatggaggctccactctg
tcgcacactacagtatcaatagctaccacaagtgctcagaacttaattaaagcaacagta
gcaactggaaccccagcaactcaacaacctacagtaatttttggaggacaaactcaaacc
ccagtacaaccccaaggtcagcctcgattgccacttccacctcatacgacagcacaagta
ccagcacagccccaggtcatacctagctctcctgtaccagggactaccgttgtatcacag
gaaatgcaagagaatgtgaagaaatgcaaaaactttttagctaccctgataaaacttgct
tcccataattcaccttctccagaaacatcccataatgtgaaagctctggttcaggatttg
ctggatgcaaagattgatccagaagaatttacaggctgccttcagtcagagctgaaatca
tctcctcagccatatctagtacctttcctgaagatcatccagtcaacatctgctcaaact
gcgaaacgaaaccctgcttgccagactacccagattaggatgccagtggtaataactcag
accattagaccacaaggcacagtagggaaggcaccaacaatacaagccagccaaagtcct
gggggctttggtgttcaggtctctgcaaatcagaaaaacaagttgaatgaccctggaggt
ggatctttcagagatgacgatgacatcaatgatgttgcctctatggctggagttaacctt
aatgaagaaagtgcccgaattatggcaaccaactccgacttggttggaacccagatacag
tcttgtaaagatgaaccctttcttgctgctatccctttacataaacgaatactagaaatg
gctaaaaaattaggaattacagatgtgcccactgaggtggttacctttatttcccatgca
acacaaaaccgattgagaacagtgatagaaaaagtaacaatggtaacacagcaccgaatg
gaatcgcacaaagacgatgaatggtatgaacaggctacagatgttcgatcacagctgaag
ttttttgaacagttggagcatttagaaaagcaaaggaaagatgaacaagagagggaaatt
ttgttaaaggcagccaagagtcgctcaaggcaagaagacccagagcaagctaggctgaaa
caaaaagcaaaggagatgcagcaacaagaactagcacagatgaggcaaagggatgccaac
ctaactgcattggcagctattggtccacggaagaaacggaagcttgattcagctggctta
cttaccataggaggagaggttttgggcatgaccagtggaagtcaggctggttttggggct
ccttcatccagacagtatgcacgacagaaaataactcgagtaaacctcagggacttcatc
ttttacatggaacaggaaagagaaactagccattctctcctgctctacagagctttgctt
aaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (49)   

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