KEGG   Chrysemys picta (western painted turtle): 101936058
Entry
101936058         CDS       T04662                                 
Name
(RefSeq) caltractin-like isoform X1
  KO
K10840  centrin-2
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101936058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpic03019]
    101936058
   03036 Chromosome and associated proteins [BR:cpic03036]
    101936058
   03400 DNA repair and recombination proteins [BR:cpic03400]
    101936058
Messenger RNA biogenesis [BR:cpic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     101936058
Chromosome and associated proteins [BR:cpic03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    101936058
   Centrosome duplication proteins
    Centriole replication proteins
     101936058
DNA repair and recombination proteins [BR:cpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      101936058
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF-hand_4 Dockerin_1 HerA_C EF-hand_11 Nop5_N LETM1_RBD
Other DBs
NCBI-GeneID: 101936058
NCBI-ProteinID: XP_005311044
UniProt: A0A8C3P3A6
Position
9:complement(40555948..40567985)
AA seq 189 aa
MGWGGIVVGLLPLPRAGGMASSPKKVMEGAVTWKKKVAPKLVLTEEQKQQLREAFDLLDT
DGTGTVDVKDLKVSIRALGYEPKKDEMKKIVSEVDKEGSGKINFDSFLYAMTQKMSEPES
REDILKAFKLFDDNGTGKISFQNLKRVAGEIGENLTDEELQEMIDEADVDGDGEVNEQEF
LRIIRMNSM
NT seq 570 nt   +upstreamnt  +downstreamnt
atggggtggggtgggattgttgtcggcttgctgcccctgccgcgagcgggcgggatggct
tccagccccaagaaagtgatggaaggggcagtgacctggaagaagaaggtggcacccaag
ttggtactcactgaagaacagaaacagcagttgcgagaggcctttgatttgcttgatacc
gatggcactggtactgtcgatgtgaaggacttgaaggtatccataagagcccttgggtat
gaacccaagaaagacgagatgaagaaaattgtatcagaagttgataaggaaggatcaggg
aagatcaacttcgattcctttttgtatgcgatgactcagaaaatgtctgagccagaatcc
agagaggacattctgaaagccttcaagctctttgatgacaatggaactggcaaaatctct
ttccaaaatctcaaacgtgtggccggtgagattggggaaaacctcacagatgaggagctg
caggaaatgattgatgaagcagatgtggatggagatggggaagtgaatgaacaggagttc
ctgcggattataaggatgaacagcatgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (47)   

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