KEGG   Chrysemys picta (western painted turtle): 101936852
Entry
101936852         CDS       T04662                                 
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X2
  KO
K10858  DNA mismatch repair protein PMS2
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03430  Mismatch repair
cpic03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101936852 (PMS2)
   03460 Fanconi anemia pathway
    101936852 (PMS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpic03400]
    101936852 (PMS2)
DNA repair and recombination proteins [BR:cpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     101936852 (PMS2)
SSDB
Motif
Pfam: MutL_C DNA_mis_repair
Other DBs
NCBI-GeneID: 101936852
NCBI-ProteinID: XP_008162803
Position
Unknown
AA seq 619 aa
MPQNLFTITGFVSHCDHGVGRSTTDRQFFFVNQRPCDQSKISKVVNEVYHMYNKHQYPFI
VLNICVDSECVDINVTPDKRQILLQQEKVLLAILKTSLVGMFGSNVNKLNINQKLLDITG
NFKKIVAEETEKPQTGMLLDSAAQNPRGEEKRAMTIVKLRESFSLHQMTESSFQSPSNVG
KQHNSPGKRELMSFLNTSSPVKSQKSISSKESEHWRQMDSNTYSVTSRDLRKLENDTDSG
CGSTSAESNVGFSTPEVGSCLSNESAGSSPEEEFRISKEELQSVCLETVKLSEESLECDA
KLSGVEHELTQMGEQNERSELPQQANSFSPNVKRFKSEQVNLKAATCPELRNAENCASVP
HVDVPIEIKKKTLPLEFSMSSLAERVKRLIQQQQKKAEAQNYRRFRAKISPGDNKTAEDE
LRKEISKEMFAKMEIIGQFNLGFIVAKLNSDLFIIDQHATDEKYNFEMLQQHNVLQGQKL
IAPQNLNLTAVNETILIENLEIFRKNGFDFVIDEDAPVTERVKLISLPTSKNWTFGPQDI
EELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALTVNEMKKLITHMGEIEHPWNC
PHGRPTMRHIVNLDLISQE
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgccacagaatctttttactattacaggcttcgtttcccattgtgatcatggtgttgga
aggagtacaacagatagacagtttttctttgtcaatcagcgaccatgtgaccaatcaaag
atttccaaagttgtgaatgaagtttaccacatgtacaataagcaccaatatccatttatc
gttcttaacatttgtgtagattctgagtgtgttgacatcaatgtaactcctgacaagagg
caaattttactgcaacaggagaaagttttgctagcaattttaaagacgtctcttgtggga
atgtttggtagcaatgttaacaaacttaacatcaatcaaaaactgctggatattacaggt
aacttcaaaaagatagtagcagaagaaacagaaaagcctcagacaggaatgctgcttgat
tctgcagcccagaatccaaggggagaagagaaaagagcaatgactattgttaaattaaga
gagtcattctctctccatcaaatgacagaaagcagttttcagagccctagcaatgtcgga
aagcaacacaactccccggggaagagagaacttatgtcatttcttaacacttcaagtcct
gtaaagagtcaaaagtccatctccagcaaggagtctgaacactggaggcagatggactca
aatacatactcagttactagcagagatttgaggaagttagaaaatgacacagattctgga
tgtggtagcacctctgcagagtcaaatgttggctttagtactccagaagttggtagctgc
ctcagcaatgaaagtgcaggcagctcacctgaagaagagttccgtatttcaaaagaggag
cttcaaagtgtatgtcttgaaactgtcaaacttagtgaggaatcattggaatgtgatgcc
aaattatcaggggttgaacatgaattgacccaaatgggtgaacagaatgaacggagtgag
ttacctcagcaagccaatagtttttccccaaatgtgaagcgttttaaaagtgagcaggtt
aatttaaaggcagccacctgtccagaactgagaaatgctgagaactgtgcatcagtgcca
catgttgatgtaccaattgaaattaaaaagaaaactctgccacttgagttctctatgagt
tctttagcagaaagagtaaaaaggctaatacagcagcaacagaaaaaggcagaagcacag
aattatagaagatttagagcaaagattagccctggagacaataaaacagcagaggatgaa
ttaagaaaagaaatcagtaaagagatgtttgcaaaaatggaaatcataggtcagttcaat
ttaggatttatagtagccaagctgaactctgatctcttcataattgaccaacatgctact
gatgaaaaatacaactttgagatgttacaacagcacaacgttctccaaggtcagaagctg
atagcgccacaaaatcttaatttaactgctgtaaatgaaactatattgattgaaaacctg
gagatttttagaaaaaatgggtttgattttgtcattgatgaagatgctcctgtaactgaa
agggttaagttgatttccttgccaacaagcaaaaattggacttttggtccacaggacata
gaggagttgattttcatgttaagtgattgcccaggagtcatgtgtaggccctccagggtc
agacagatgtttgcttctcgagcttgtagaaaatctgtgatgattggaactgcacttact
gtaaatgagatgaagaaattgatcacccacatgggtgagattgagcatccttggaactgt
ccccatggaaggcccactatgaggcacatagtcaatttagatctaatttctcaagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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