KEGG   Chrysemys picta (western painted turtle): 101940890
Entry
101940890         CDS       T04662                                 
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03022  Basal transcription factors
cpic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101940890 (GTF2H2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101940890 (GTF2H2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpic03021]
    101940890 (GTF2H2)
   03400 DNA repair and recombination proteins [BR:cpic03400]
    101940890 (GTF2H2)
Transcription machinery [BR:cpic03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101940890 (GTF2H2)
DNA repair and recombination proteins [BR:cpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101940890 (GTF2H2)
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA IBR HscB_4_cys Matrix VWA_3
Other DBs
NCBI-GeneID: 101940890
NCBI-ProteinID: XP_005288269
UniProt: A0A8C3FZ62
Position
Unknown
AA seq 395 aa
MDDEPERTKRWEGGYERTWEVLKEDESGSLKATIEDILFKAKRKRIFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHTTALKKAVDLTCHGEPSLYNSLNLAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHISPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVTLEEYKGERYCQGCQGEIKDQHVYIC
KVCQNVFCVECDLFVHDSLHCCPGCIHKHPAPPCI
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggatgacgagcctgaaagaaccaaacgctgggaaggaggttatgaaagaacatgggag
gttctcaaagaagatgaatctgggtcactgaaagcaactatagaggacattctttttaag
gctaagagaaaaagaatctttgaacaccatgggcaagttagacttggaatgatgcgtcac
ctttatgtggtggtagatggatcaagaactatggaggaccaagatttaaaacctaacagg
cttacgtgtaccttaaagttattggaatattttgttgaagaatactttgaccaaaatcct
attagtcagattggtataattgtaactaagagtaaaagagctgaaaagctgacagaactt
tcaggaaacccaagaaagcatacaactgctctgaagaaagctgtagatctgacctgccat
ggagaaccatctctgtataactctttaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttgattatcttcagtagcctgacaacgtgtgatccatct
aatatctatgatctaattaagtgtttaaaggcagttaagatcagagtatctgtcatcggc
ctatctgctgaagttcgagtttgtactgtacttgcccgagaaacgggtggaacataccat
gtaattttagatgaaagccactataaggagctgctgatgcatcatattagccctccacct
gccagttcaagttctgaatgctcccttattcgaatgggttttcctcagcataccattgca
tctctctctgatcaggatgctaaaccatcatttagcatggcgcacttggaaaacaacagt
gatccaggtctcacgttgggtggatatttctgtccccagtgtagggccaaatactgtgaa
ctccctgtggaatgcaaaatctgtggtcttacattagtctctgcaccccatctagctcgg
tcttaccatcacctgtttcctttggatgcctttcaagaagttacactggaagaatataaa
ggagaacgctattgtcaaggctgccaaggggagattaaagatcaacatgtttacatttgt
aaagtctgccagaatgtattttgtgtggaatgtgacttatttgttcatgattctctgcac
tgctgtcctggctgcattcacaagcatcctgctcctccatgcatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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