KEGG   Chrysemys picta (western painted turtle): 101947957
Entry
101947957         CDS       T04662                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
Organism
cpic  Chrysemys picta (western painted turtle)
SSDB
Motif
Pfam: VWA VWA_2 Radical_SAM VWA_CoxE DUF1194 Sulf_coat_C HpcH_HpaI
Other DBs
NCBI-GeneID: 101947957
NCBI-ProteinID: XP_005278719
Position
2:complement(85713329..85743094)
AA seq 980 aa
MKMLLTLFFFLIGSQTSVTQTPAPTSADIVLLVDSSNSLGNKAFPSMKSFISKMISHLTA
TPNQYRIALAQYSDDLHVEFLLDTYKAKNSMLNYVKKNVVFKGGSVKTGNALREVHKTFF
KGPASGRDKERILVVLTSGASEDAVEEPAKILKSDGVKIIAMGIQDVSPQELQSMATSQF
SYKFRTVRDLSMSSQNLTKIIEDIIQTDIIASASEREVCKSDSVADVVFIVDEGVSKPNA
EDIKKFLQDTVSFLDVRKNCIKVGLVTYSSESHVLSLLSEETNKTAILQKVQGFSPREGK
ANTGAAIKATRQRVFSGSRKAQGIEQIAILITHRPSEDNVSEAAHDLRRAGVTVFTIGIE
NADYTQLTQIASYPQQQYVTKLTAFSDLPKEAKTLQKKLLNQIQDKLYVQSERRELLKAG
SVDTEEADIYVLIDGSTSIYPVAFGDIKNFLKEVIKMFNIGPNKVRFGAVQFSHDKRLEF
ELDEYSKTNDLETAIDNIRQIYGDTHIGEALTFMQPLFKRAREQRAGRVPCYLIVLTDGE
SHDSVKEPAERLRNEKVNIYAIGVKDANEAQLHEIAGSKSRTFFVQEFDSLKNIKNEIVQ
VIRSGEACKEMTADIMFLVDSSGSIGPENFLKMKNFMRELVNKSDISTDRVQVGVIQFSG
QPREEFQLDRYSSKTDIFSAIDKMRLMGDNALTGSALTFVSDYFKPPKGARPAVKKFLIL
ITDGEAQDEVKSPATALRDQGVIIYSVGVFNANKPQLEEISGKPELVFYVEEFDILKHIE
DEIIFGICRPHEEKCKRIERLDVVFVIDGSGSISPLQYQAMQDFMIDLVKKSDVAPDRVQ
FGAVKYSDEPETFFYLNTFTTKSEIVEAIQNDRTIGGSTFTAKAVGYSEALFAQEHGGRK
SKGVPQILIVITDGESRDAAELNDTAKRLRDNGIIIYAVGIKGAKPDELLAMAGSEDKYY
YVDTFEGLKNTSVAISEKMW
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgaagatgctgctgactttgttcttcttccttattgggagtcaaacttcagtaactcag
acacctgcccctacatctgcagatattgtccttttggttgacagctctaatagcctggga
aacaaggcattcccctctatgaagtcttttattagcaaaatgatcagtcatttaacagcg
actcctaaccaataccgtatcgcgcttgcccagtacagtgatgatttgcacgttgaattt
ctgctggacacctataaagcaaagaactcaatgctgaattatgtaaaaaaaaatgttgta
ttcaagggtggttcagtaaaaactggcaatgcccttcgagaagttcacaagacctttttc
aaaggaccagctagtggaagagacaaagaacgaattctggtagtcttgacttcaggggca
tcagaggatgctgtagaagagcctgccaagatcttgaaaagtgacggggtaaaaatcata
gccatggggattcaggatgtttctcctcaagaattgcagtcaatggctacatctcaattt
tcttataagtttcgcacagtgagggatctcagtatgtcttctcaaaacctgaccaagatc
attgaggacattattcaaacagatataattgcaagtgcttctgagagagaagtttgtaag
agtgattccgttgctgatgttgtgttcatagtagatgagggtgtttcaaaaccaaatgct
gaagatattaaaaagttcctgcaagatacagtttcctttcttgatgtgaggaagaattgt
ataaaggttggcctagtgacatacagcagtgagtcacatgtgttatctttattgagcgaa
gaaacaaacaaaactgctattctgcagaaagtacagggcttttctccaagggaagggaag
gccaacaccggtgctgccattaaggctacaaggcaaagagtcttctctggaagcagaaag
gcccaagggatagagcaaatagccattctgatcacccaccgaccctctgaagacaacgta
agtgaggcagctcatgatcttcggagagctggtgtgactgtattcaccataggcattgaa
aatgctgattacacccagttaacccagatagcatcatatcctcaacagcaatatgttact
aagctgacggcattttctgacctgccaaaagaagccaaaactttacaaaagaaactcttg
aatcaaattcaggacaagctgtatgtccagtctgaaagaagagaactacttaaagcagga
tctgtggacacagaggaagctgatatttatgtcctcattgatggctcaacaagcatttat
cctgttgccttcggagacatcaaaaattttttgaaggaagtgattaagatgtttaacata
gggccaaataaagttcgctttggagctgtgcagttctcacatgacaaaagactggagttt
gaacttgatgaatacagcaaaacaaatgatttagagacggccattgacaacattaggcaa
atatatggggatacccatattggagaagcattgactttcatgcagccactgtttaaaagg
gcaagggagcagagagctggcagggtgccttgttacctcattgtcctaacagatggggag
tcacatgacagtgtgaaggagcctgctgagagactgaggaatgagaaggttaatatttat
gccattggtgtaaaagatgcaaatgaagcacagctccatgagattgcagggtcaaagagc
aggactttctttgtgcaagagtttgactccttgaaaaacataaaaaatgaaattgttcaa
gtgatccgttctggagaagcctgcaaagaaatgacagctgacatcatgtttctagtggac
agttctggaagcataggaccagagaactttttgaaaatgaaaaactttatgagagaactg
gtgaacaaatctgacatcagcacagaccgagtgcaggttggggtcatccagttcagtggc
caaccacgggaagagttccagcttgaccgatactcttcaaaaactgacattttcagtgct
attgataagatgcgccttatgggggacaatgcactaacaggaagcgcattgacatttgtg
tctgattatttcaagcctcccaaaggtgcacgtccggctgtcaaaaagtttcttatcctg
attacagatggggaagcgcaggatgaagtaaaaagtccagcaacagccttacgtgatcaa
ggtgttattatctactctgttggggtgtttaatgcaaataaacctcagctggaagagatt
agtgggaagcctgagctggttttttacgtcgaggagtttgatattctgaagcacatagaa
gatgagatcatctttggaatatgcaggcctcatgaggaaaaatgcaaaaggatagaaaga
ttagatgttgtgtttgtgatagatggatctgggagcataagtcccttacagtaccaggcc
atgcaagacttcatgattgatttggtgaaaaaatctgatgttgctccagatagagttcag
tttggagctgtaaaatattctgatgaaccggaaacgtttttctaccttaatacgttcaca
acaaaatccgagattgttgaggctatccagaatgatagaactataggaggttcaacgttc
acagccaaggcagttggctattcggaagctctgtttgctcaggagcatggcggccgcaaa
agcaagggagttccacagattcttatagtgataacagacggtgagtcccgtgatgcagca
gagctcaatgacacagccaagagattaagagacaatggaattattatctatgctgttggg
ataaaaggagcaaaaccggatgagcttttggccatggctggatcagaagacaaatattac
tatgtggatacatttgaaggactcaaaaacacatctgtagcaatatcagaaaaaatgtgg
tga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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