KEGG   Chrysemys picta (western painted turtle): 101950266
Entry
101950266         CDS       T04662                                 
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03250  Viral life cycle - HIV-1
cpic04144  Endocytosis
cpic04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101950266 (VPS4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101950266 (VPS4A)
  09143 Cell growth and death
   04217 Necroptosis
    101950266 (VPS4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpic04131]
    101950266 (VPS4A)
   03400 DNA repair and recombination proteins [BR:cpic03400]
    101950266 (VPS4A)
Membrane trafficking [BR:cpic04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    101950266 (VPS4A)
DNA repair and recombination proteins [BR:cpic03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101950266 (VPS4A)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_14 AAA_22 AAA_5 IstB_IS21 RuvB_N AAA_25 AAA_17 AAA_18 DUF815 AAA_2 AAA_33 RNA_helicase nSTAND3 AAA_24 PhoH ResIII Mg_chelatase AAA_7 AAA_28 NACHT Parvo_NS1 bpMoxR AAA_30 YhdB Sigma54_activat
Other DBs
NCBI-GeneID: 101950266
NCBI-ProteinID: XP_005310637
UniProt: A0A8C3PFJ0
Position
15:complement(2686205..2694313)
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
VQYLDRAEKLKDYLRNKDKQSKKPVKESPNDSKGSDSDSEGENPEKKKLQEQLMGAIVME
KPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAGRRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGNTPRNLTEANIHELARKTDGYSGADISVIVRDALMQPVRKVQSATHFKKVRG
PSRTNPSVTIDDLLTPCSPGDPEAIEMTWMEVPSEKLLEPVICMSDMLRSLATTRPTVNA
EDLLKVKKFTDDFGQEG
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacatcaaccctgcagaaagctatcgatctggtaacaaaagcgactgaggaggat
aaggccaagaactatgaggaggcgctgcggctgtaccagcacgcagtggagtactttcta
catgccatcaaatatgaggctcacagtgacaaggcgaaggagagcatccgggcgaagtgc
gtgcagtacctggatcgggcggagaagctgaaggattatctacgcaacaaagacaaacaa
agcaagaagcctgtcaaagagtctccaaatgatagcaaggggagcgacagtgacagcgag
ggtgagaatccggagaagaagaagctgcaggagcagctgatgggtgccattgtgatggag
aagcccaatgtgcggtggagcgatgtggctggcctggagggcgccaaggaggctctgaag
gaggctgtgattttacccattaaattcccacacttattcacaggtaagcgcaccccctgg
cgtgggattctgctctttgggccccctggcacggggaagtcgtacctggccaaggctgtg
gccaccgaggccaacaactccacgttcttctccgtgtcgtcctcggacctgatgtcgaag
tggctgggagagagcgagaagctggtgaagaatctcttcgagctggcaaggcagcacaaa
ccctccatcatcttcatcgacgaggtggactctttgtgcggctcccggaatgagaacgag
agcgaggctggccgcaggatcaagacggagttcctggtgcagatgcagggtgttggtaat
aacaacgacgggaccctggtcctcggtgccacaaatatcccctgggtcttagactcggcc
attaggagaaggtttgagaagcgcatctacatccccttgccggaggaggcggcccgagcc
cagatgttcaggctgcacctggggaacacaccacgcaacctgacagaggccaacatccac
gagctggccaggaagacggacggctactcgggggccgacatcagcgtcatcgtgcgcgac
gccctcatgcagcccgtccgcaaagtgcagtcggccacacacttcaagaaggtgcgaggc
ccgtctcgaaccaatcccagcgtaaccatagatgacctcctgaccccatgctcgccgggg
gaccccgaagccattgagatgacttggatggaggtgcctagtgagaagctgctggagcca
gtgatctgcatgtcagatatgctgcgctcgctggccaccacccgccccaccgtgaatgca
gaggacctcctgaaggtgaagaaattcacagacgactttggacaggaaggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (51)   

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