KEGG   Campylobacter pinnipediorum: CPIN18020_0003
Entry
CPIN18020_0003    CDS       T05033                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
cpin  Campylobacter pinnipediorum
Brite
KEGG Orthology (KO) [BR:cpin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpin03032]
    CPIN18020_0003 (gyrB)
   03400 DNA repair and recombination proteins [BR:cpin03400]
    CPIN18020_0003 (gyrB)
Enzymes [BR:cpin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CPIN18020_0003 (gyrB)
DNA replication proteins [BR:cpin03032]
 Prokaryotic type
  DNA Topoisomerases
   CPIN18020_0003 (gyrB)
DNA repair and recombination proteins [BR:cpin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CPIN18020_0003 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook DUF5321 HATPase_c_3
Other DBs
NCBI-ProteinID: AQW85262
Position
2554..4884
AA seq 776 aa
MSEIENKAYGAGSIKVLKGLEAVRKRPGMYIGDTNINGLHHMIYEVVDNSIDEAMAGYCD
TINVEITTEGSVIVTDNGRGIPVGMHPTEKIPAATVVLTVLHAGGKFDKDTYKVSGGLHG
VGVSVVNALSKKLVLNIKRNGSLHRQEFSKGIPVTDLEIIKSTNRTGTSVEFWVDDSIFE
VTDFDKNILAKRFKELAYLNPKITINFKDSRVGFSETYKFEGGLESFVNDLNKSNAVSKA
VSFSGGEEDVIVDFALIYNETYSENLLSFVNNIKTPDGGTHEAGFRAGLTRVITNYISAN
ASAREKDTKITGEDIREGLIAVVSVKVPEPQFEGQTKGKLGSSYVKPIVQKMTFEVLTKY
FEENPIEAKAIMNKALMAARGREAAKKARDLTRKKESFSVGTLPGKLADCQSKDPTISEL
YLVEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIKNMITALGCGIGE
EFDAEKLRYNKIIIMTDADVDGSHIQTLLLTFFFRFLNQVVENGYVYLAQPPLYRYEKGK
KEVYLKDDKALNEFLIQTGIEGIDFKGIGTNDLVDFLKIVAAYDNVLNELSKRFNLLIAL
RYMIENPDIIGKTYQEIFEILKVYLENKGYNILNSYVNDDEVRIYVQTENGLDEFYINDN
LFSNPLFEEALHINRKIVERDMDFGGKDVLDVLKEVIDNAKKGNNVKIQRYKGLGEMNPD
QLWETTMNPENRRLLKVNIQDAQSASDTFNLFMGDEVEPRRNYIQEHAKDVKHLDI
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgtctgaaatagaaaataaagcatacggtgcaggaagtattaaagttttaaaggggcta
gaagctgttagaaaaagaccaggtatgtatatcggtgatacaaacataaatggtcttcat
catatgatatatgaggttgtagataactctatagatgaggctatggctggttattgtgat
actataaatgttgaaattacaacagaaggtagtgttatagttacagataacggtcgtggt
attccagttggtatgcacccaacagaaaaaattccagcagctactgttgttttgacagtt
ttacacgctggtggtaagtttgataaagatacttataaagtttcaggtggtcttcacggt
gttggtgtttctgttgtaaatgctttatcaaaaaaattagttttaaatatcaaaagaaat
gggagcttacatagacaagagttttcaaaaggtattccagtaacagatcttgaaataata
aaatcaacaaatagaacaggaacttctgttgagttttgggtagatgatagtattttcgaa
gttactgattttgataaaaatatacttgcaaaaagatttaaagaattagcatatctaaat
ccaaaaataactataaatttcaaagatagtagagttggatttagtgaaacttataaattt
gaaggtggtcttgaaagctttgtaaatgatttaaataagtcaaatgctgtaagtaaagct
gtctcatttagtggtggtgaagaggatgttatagttgattttgcacttatatataatgaa
acatatagtgaaaatttacttagttttgtaaacaatatcaaaactccagatggtggaaca
cacgaagctggttttagagccggtttaactagagttataacaaattatatatcagctaat
gcttcagctagggaaaaagatacgaaaataacaggcgaagatataagagaaggtcttata
gctgttgtaagtgttaaggttcctgaaccacaatttgaaggtcaaacaaaaggaaaactt
ggctcaagctatgtaaaaccaatagttcaaaagatgacttttgaagttctaactaaatat
tttgaagaaaatcctatagaagcaaaagccataatgaataaagctttaatggctgctcgt
ggtagagaagctgctaaaaaagcaagagatttaactcgcaaaaaagagagttttagtgta
ggaactttacctggaaaattggctgattgtcaaagtaaagatccaactataagtgagctt
tatttggttgagggcgattctgctggtggttctgcaaaacaaggtcgtgatagagttttt
caagctatacttcctttaaaaggtaaaattttaaatgttgaaaaatcaagacttgataaa
attttaaaatcagatgaaataaaaaatatgataacagctcttggttgtggtatcggtgag
gaatttgatgctgaaaaattaagatataataaaataataataatgacagatgccgatgtt
gatggaagccatatccaaacactacttttgacattcttctttagatttttaaatcaagtt
gttgaaaatggttatgtgtatttagctcaaccacctttatatagatatgaaaaaggtaaa
aaagaggtttatttaaaagatgataaagctttgaatgaatttttgattcaaacagggatt
gaagggattgattttaaaggaatcgggactaatgatttagttgattttttaaagatagtt
gcagcttatgataatgtattaaatgaactttcaaagagatttaatttacttattgcttta
agatatatgatagaaaatccagacataataggaaaaacatatcaagaaatttttgaaatt
ttaaaagtatatcttgaaaataagggttataatatattaaactcatatgtaaatgatgat
gaagtaagaatttatgttcaaacagaaaatggtcttgatgagttttatataaatgataat
ttattttcaaatcctttatttgaagaggcactccatataaatagaaaaattgttgaaaga
gatatggattttggtggaaaagatgttttagatgtcttaaaagaggttattgataatgct
aaaaaaggaaataatgtaaaaattcaaagatataaaggtcttggtgagatgaatcctgat
cagctttgggaaactactatgaatcctgaaaatagacgtttattaaaagtaaatatacaa
gatgcgcaaagtgcaagtgatacatttaatttatttatgggtgatgaagttgagccaaga
agaaattatattcaagaacatgcaaaagatgtaaaacatttggatatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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