KEGG   Campylobacter pinnipediorum: CPIN18020_0160
Entry
CPIN18020_0160    CDS       T05033                                 
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
cpin  Campylobacter pinnipediorum
Brite
KEGG Orthology (KO) [BR:cpin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpin03016]
    CPIN18020_0160 (trmA)
Enzymes [BR:cpin01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     CPIN18020_0160 (trmA)
Transfer RNA biogenesis [BR:cpin03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    CPIN18020_0160 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_15 Methyltransf_31 Methyltransf_4 Methyltransf_25 Met_10 Methyltransf_12 RNase_3_N Ubie_methyltran MTS PrmA Methyltransf_11
Other DBs
NCBI-ProteinID: AQW85415
Position
163011..164117
AA seq 368 aa
MDCKYLKECGSCSLFMPYSEQIEFKKELIGSKFNQFFDGVFEFFGSNDKHYRIRSEFGIW
HSQDDINYTMNSTNKSKIFIDECPKVSKPIFDIMPKLLNILRNNTHLKERLFGVEFLDVN
GKILLTLLYHKKLDDDFKNVIDNLQKRLDVFVIARSKGKKISNSDISLVEKLIINNKEYK
FTFSENAFVQPNKQVNQKMIQWALSCVDSADDLLELYCGHGNFTIPISFAFNKVLATEIN
KSSIANAIKNCELNGVDNIKFVRLSADELMQAFAKEREFFRLKEVDLFDYNFTHIFVDPP
RAGLEMSVINFIKNYENIIYVSCNPDTLFLNLQELCKTHTVERFAIFDQFANTHHIECGV
LLKERKNI
NT seq 1107 nt   +upstreamnt  +downstreamnt
ttggattgtaaatatttaaaagagtgtggaagttgtagcctttttatgccatatagtgag
caaatagagtttaaaaaagagctaataggctcaaaatttaatcagttttttgatggtgtt
tttgagtttttcggctctaatgataaacattatagaatcaggtcagagtttggtatatgg
catagtcaagatgatataaattacactatgaattctaccaataaatctaaaatttttata
gatgaatgcccaaaggtaagcaagcctatttttgatattatgccaaaactacttaatatt
ttaagaaacaatactcatttaaaagagcgactttttggagttgagtttttagatgtaaat
ggtaagatacttttaacacttctttaccataaaaaactagatgatgattttaaaaatgtt
attgataatttgcaaaaacgtcttgatgtgtttgtgatagctcgttcaaaaggcaaaaag
atatcaaactcagatattagtttggtagaaaaacttattataaacaataaagagtataaa
tttacttttagcgaaaatgcatttgttcaaccaaacaaacaagttaatcaaaagatgata
caatgggctttgtcttgtgttgatagtgccgatgatttgcttgagctttattgcggtcat
ggtaattttacgatacctataagctttgcttttaataaggtgttggcgactgagataaac
aaaagttctattgcaaatgctattaaaaattgcgaattaaatggtgtagacaatataaaa
tttgtaagactcagtgctgatgagctaatgcaagctttcgcaaaagagcgagagtttttt
agactaaaagaagttgatttgtttgattataattttactcatatttttgttgatccgcca
cgtgcaggacttgaaatgagtgttataaattttataaaaaattatgaaaatataatatat
gtatcctgtaatccagatacattatttttaaatttacaagaattatgtaaaacacatacg
gttgagagatttgcgatttttgatcagtttgcaaatactcatcatattgagtgtggtgtt
ttattgaaggagagaaaaaatatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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