KEGG   Chryseobacterium piperi: CJF12_09020
Entry
CJF12_09020       CDS       T05071                                 
Name
(GenBank) ATP-dependent helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cpip  Chryseobacterium piperi
Pathway
cpip03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CJF12_09020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpip03019]
    CJF12_09020
Enzymes [BR:cpip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CJF12_09020
Messenger RNA biogenesis [BR:cpip03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CJF12_09020
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_19 UTP25 AAA_30 P-loop_SecA AAA_22 Phage_integrase CheB_methylest
Other DBs
NCBI-ProteinID: ASW74417
UniProt: A0A086BKW1
Position
2078143..2079411
AA seq 422 aa
MLFTDLKIIKPILDALQQEGYEKPTPIQGKAIPSILEKKDLLGTAQTGTGKTAAFAIPIL
QNLAERQGPKSNHIKALILTPTRELAIQIEESFNAYGRNLPLRKLVIFGGVKQGSQEAAL
KKGVDILVATPGRLLDFIAQGIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLLPPRRQ
TLFFSATMPPEIQKLANSILNNPVQVEVTPVSSTAETIKQSVYFVQKEDKLGLLTHILKD
HISESVLVFSRTKHGADKIARTLQKSNISAEAIHGNKSQNARQNALNNFKSGKTRVLVAT
DIAARGIDIDELKYVINYELSDVSETYVHRIGRTGRAGAEGTSISFVDSLDLLNLKNTEK
LIGLKIPVVKDHPFHTDNLVAQKRDSNNKPMTGNASSGRPKPTQKKDVGFKKPKNKSFFR
KK
NT seq 1269 nt   +upstreamnt  +downstreamnt
ttgttatttacagacttaaaaattatcaagcccattttagatgcgcttcaacaggaaggt
tatgaaaaaccaactcctatacaaggaaaagctattccatctattcttgaaaaaaaggat
ttattaggaactgcacagaccggaacaggtaagactgctgctttcgctattcctattcta
cagaatctggcagagcgccagggcccaaaaagcaatcatatcaaagctttaattcttact
ccaacgagagaattagcaatacagatcgaagaaagctttaatgcctacggaagaaacctg
cccttaagaaagctggttatttttggaggagtaaagcaaggatcacaagaagctgctcta
aaaaagggagtagatattttagtggcaaccccgggaagacttcttgattttattgcacaa
ggcattataagccttaaaaatcttgaaatttttgttcttgatgaagcggacagaatgttg
gatatgggctttgtacatgatgttaaaagaattattaagcttttgccgccaagacgtcaa
actttatttttctctgctaccatgccgcctgaaattcagaagctggccaattcaatatta
aacaaccctgtacaggtagaagtaactccggtttcttcgacagcagaaactattaaacaa
tctgtttatttcgttcagaaagaagataaattaggattgcttacccatattttaaaagat
catatttctgaatcggttttagttttttccagaaccaaacacggtgcggataagattgct
agaacattacagaaaagtaatatttctgcagaggctattcacggaaataaatctcaaaat
gcacgtcaaaatgctttgaataatttcaaatcaggaaaaacgagagttttggttgcaacg
gatatcgcagcaagaggaattgatattgatgaactgaaatatgtaatcaactatgagctt
tctgatgtttcagaaacttacgttcaccgaatcggaagaaccggaagagccggtgctgaa
ggaacttcaatctcttttgtcgatagcctagatcttttgaatctgaaaaatacagagaag
cttatcggattaaaaatccctgtagttaaagatcatccgttccacactgataatctggtc
gctcagaaaagagattccaacaataaaccgatgaccggtaatgctagctcaggcagacca
aaaccaactcaaaagaaagatgtaggttttaaaaagccaaaaaataaaagctttttcaga
aagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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