KEGG   Citrobacter portucalensis: FOB25_13935
Entry
FOB25_13935       CDS       T06238                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cpot  Citrobacter portucalensis
Pathway
cpot02020  Two-component system
cpot02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cpot00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FOB25_13935 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FOB25_13935 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpot03021]
    FOB25_13935 (rpoN)
Transcription machinery [BR:cpot03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FOB25_13935 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: QET57462
Position
complement(2929692..2931125)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEIDTQE
KQDSETLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVTLDDILESMGDDDVGMDEIEAVLK
RVQRFDPVGVAAKDLRDCLLIQLSQFDKATPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWVVELNGDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggctatccgtctgttgcagctgtccacgctggaacttcagcaagaacttcagcaagcg
ctggaaagtaacccactgctcgagcaaaccgatcttcacgacgaaattgatacccaggaa
aaacaggacagcgaaaccctcgacaccgcagatgcactcgaacaaaaagagatgcctgag
gagttgccgcttgacgccagttgggatgaaatttacaccgccgggacgccttcgggcacc
agcggagattacatcgacgacgagctgcctgtgtatcagggtgagaccacgcaatcacta
caggattacctgatgtggcaagtggaactgaccccgttctcggataccgatcgcgccatt
gcgacatccattgtagatgcggtagacgaaaccggttatctcaccgtgaccctggacgat
attctcgaaagcatgggcgatgacgacgtcggtatggacgaaatcgaagctgtgcttaaa
cgcgttcagcgctttgatcccgttggcgtggccgccaaagatctccgcgactgcttactg
atccaactttcgcagtttgataaagccacgccgtggctggaagaagcgcgcctgatcatc
agcgatcacctcgatctgttagccaaccatgacttccgcaccctgatgcgcgtgacccgg
ctgaaagaagacgtgctgaaagaagccgtcaatcttattcagtcgctggatccaagacct
gggcaatcgatccagaccggcgagccggagtacgtcattccggatgtgctggtgcgtaag
cataacgatcgttgggtggtcgaactcaacggcgacagcattccgcgcttacagattaac
cagcactacgccgccatgtgcaatagcgcgcgcaacgatgccgacagccagtttattcgt
agcaatctgcaagatgcgaagtggctgattaaaagcctggaaagccgcaatgatacgttg
ctgcgcgtcagccgctgcatcgttgagcagcagcaagctttctttgagcaaggcgaagag
tttatgaaaccgatggtgctggcggatatagcccaggccgtcgagatgcacgaatcgacc
atttcccgtgtgaccacgcaaaagtatctgcacagtccgcgcggcatttttgaattgaag
tatttcttttccagtcacgttaacactgaaggcggaggtgaagcctcatccacagctatc
cgtgcgctggtgaagaaattaattgctgcggaaaaccccgcgaaaccgctgagtgacagc
aagttaacctctatgctgtcagaacagggtatcatggtggcacgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtctaaccagcgcaaacagctggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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