KEGG   Collimonas pratensis: CPter91_2988
Entry
CPter91_2988      CDS       T04306                                 
Name
(GenBank) type VII secretion system (T7SS), usher family protein
  KO
K07347  outer membrane usher protein
Organism
cpra  Collimonas pratensis
Pathway
cpra02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cpra00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CPter91_2988
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cpra02000]
    CPter91_2988
   02044 Secretion system [BR:cpra02044]
    CPter91_2988
   02035 Bacterial motility proteins [BR:cpra02035]
    CPter91_2988
Transporters [BR:cpra02000]
 Other transporters
  Pores ion channels [TC:1]
   CPter91_2988
Secretion system [BR:cpra02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   CPter91_2988
Bacterial motility proteins [BR:cpra02035]
 Pilus system
  Fimbrial proteins
   CPter91_2988
SSDB
Motif
Pfam: Usher PapC_N PapC_C
Other DBs
NCBI-ProteinID: AMP05329
UniProt: A0A127Q5J2
Position
complement(3054943..3057708)
AA seq 921 aa
MSRSLHSSFVKPVCMITKSNGFFAFRPRLFDVFISGMLLQIGTAVATPIDPSVPATVKFD
SGSFAFGMGDLADLSRFDKANTVLPGTYRLGIVVNQNWQGLSDVEFSSVSNQGSAMPCFD
RAMLTKFGVDLDKVARGDGTRSVTEVIAHQIPANPICGNLNSWIADATVSFDAGEQTLTI
TIPQIYMNRSARGYVDPALLDSGVTAALLSYNFTSSVSTSGGGGSQSFLGLNGGVNLGDW
RLRHQGAQAWNSVTGRTAYQNTATYLQRDFSALKSQLVLGDNFTDGRIMDSIRLRGITLT
TDDRQTSQSQQGYAPVVRGTATSNARVVISQGGYTIYETTVAPGPFVIDDLYPTGYGGDL
LVTVIETDGRQSRFTVPYSAIPQLLRQGAIKYSVALGQLRQYGGIGGTTPWVMQGSLQRG
INNFLTGYGGLTASTGYWQAKVGTAVSMPIGALAIDAAVSSTKIQGYGTLQGQSLQITYN
KNISEIGTNFALGASRFSSSGYLGLNDAVSVRNLASRGADTGAVNRQRSRFDWNISQEIG
KGSMFISGSSTQYWGRNLGRQTSFSAGYGSNFGKITWSLSAQRIVSQSVQLTPEQMQMQQ
QANLFYGAGYNSGRSENRIMLSLSMPLGYDSNAPTMNSFMTHNTGSNGGNNLQVGVNGSV
GEQRNLSYGVSSSHTSGDSGSSNYFNANVGYLARSGNLSAGFSQSGNSGQVSFNANGGIV
AHPGGISLAQSLGDAIGLIEAPDAEGASISSSTGITIDSHGYAVAPYLRPYQNNTIDIDP
KGSSDDIQFKETSKTIAPRMGSVIMYKFETDNSRAVTIKALRSDGKPLPFAAEVLNEMQQ
PVGVVGQGSKAFVRKVSNTGVLTVKWGDGIDQRCQMAYTLPERVKGKDAVSFIESQCYPV
TPPAPHGSATTVPKVNATLNQ
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgagtcgatcgctacattcttcgtttgtcaaacctgtctgcatgatcactaaaagcaat
ggcttttttgcattcaggccgcgcctgttcgacgtgtttatctctggcatgttgcttcaa
ataggcactgccgttgccacacctatcgacccgtcagtaccggccacagtgaaatttgat
agcggttcgttcgcgttcggcatgggcgatctagccgatttatctcgtttcgataaagcc
aataccgtattgccaggtacctatcgccttggtatcgtcgtaaatcagaactggcaaggt
ctaagtgacgtcgaatttagttcagtatcgaatcagggaagtgcaatgccatgctttgat
cgcgccatgctcaccaagtttggcgtcgatttggacaaagtagcgcgcggcgacggcact
cgcagcgtaaccgaagtgattgctcatcaaatccccgcaaatccaatatgtggcaaccta
aatagttggatagccgatgcaactgtatcttttgacgcgggggagcaaactttgacgata
accattccgcagatatacatgaaccggtcagctcgcggctatgtggatcctgcacttctc
gatagcggcgtcacagccgctctacttagctataactttacctcttccgtctccaccagc
gggggcggcggttcacaatcttttttaggattgaacggtggtgttaatttaggcgactgg
cgtttgcgccatcaaggtgcgcaggcatggaactcagtcaccggccgcacagcctatcag
aatacggcaacctacttgcagcgtgatttcagcgcactcaaatcgcaactggtattaggc
gataattttaccgacggacgcatcatggatagcatacgactgcgcggcatcacactcacg
actgatgatcgtcaaacttcgcaatcgcagcaaggctatgcaccggtggtacgaggcaca
gctacaagcaatgcacgcgtcgtcataagccaaggcggttatacaatctatgaaaccacc
gttgcaccaggtccgttcgtcatcgatgatctttatccgacaggttacggcggcgattta
ctcgtgaccgtaattgaaacagacggtcgccaaagccggttcaccgtgccatattccgcg
ataccgcaattgcttcgtcaaggagcaatcaaatatagtgtcgcgctaggccagctcaga
caatacggcggcattggaggcaccacgccttgggtgatgcaaggcagtttgcaacgcggc
atcaataatttccttaccggatatggcggtttgactgcttcgaccggctattggcaggcc
aaagtcggcaccgcagtgagtatgcctattggtgcgctagctattgacgcggcagtatca
agcacgaagatacaaggctacggcactttgcagggacaaagtttgcagattacttacaat
aaaaatatttctgaaatcggcactaattttgcactcggagcctctcgcttttccagtagc
ggatatctaggactgaacgatgcggtcagtgtacgcaatctggcttcgcgtggagcggac
accggcgcagttaaccgccaacgaagccgtttcgattggaacattagccaagaaatcggt
aaaggatccatgttcatctccggcagctcaactcaatactgggggagaaatttgggtcgc
caaacatctttttcagccggttacggatcaaattttggcaaaataacttggagtctttcg
gcgcagcgcattgtttcgcaatcagtacagctaacgcctgagcaaatgcaaatgcagcaa
caagcaaacttattttacggcgctggttacaacagtggtcgcagcgaaaatcgcataatg
ctgtcgctgtcaatgccactgggttacgactctaatgcgccaactatgaatagcttcatg
actcacaataccggctctaacggcggaaacaacctgcaggtaggcgtgaatggcagcgtc
ggcgagcagcgtaatctcagttatggcgtatctagtagtcataccagcggtgatagtggt
agtagcaattatttcaatgcgaatgtcgggtacctagcacgcagcggaaatctaagtgcg
ggctttagccaatctggtaatagcggccaagtatcgttcaacgccaatggcggtatcgta
gcccatccgggtggtatatcgctagcgcaatcccttggagatgctatcggcctcatcgag
gcgccagatgccgaaggcgcgagcatcagcagctctaccggaattacgatcgatagccac
ggttatgccgtcgcaccatatttacgtccttaccaaaacaatacgatcgacattgatcct
aaaggttcgtccgatgatattcaattcaaggaaactagcaagacaatcgcaccgcgcatg
ggttcagtcatcatgtacaaatttgaaaccgacaatagccgtgctgtcaccatcaaagcg
ctacgaagcgacggtaagccattgcccttcgcagcagaagtattgaatgagatgcagcaa
cctgtcggtgtagttggtcagggtagcaaagcgtttgtgcggaaagtatccaacactggg
gtgctgactgtgaagtggggtgatggtattgatcaacggtgtcagatggcatatacattg
ccagaacgcgtaaagggaaaagacgctgtcagtttcattgaaagtcaatgctatcccgtt
acgccaccagctccccatggttcggcaacaactgtgccgaaagtcaatgcgactctcaac
caataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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