KEGG   Collimonas pratensis: CPter91_3330
Entry
CPter91_3330      CDS       T04306                                 
Name
(GenBank) sigma-70 region 2 family protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
cpra  Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:cpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpra03021]
    CPter91_3330
Transcription machinery [BR:cpra03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CPter91_3330
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 TPR_2 TPR_14 TPR_8 ANAPC5 TPR_12 TPR_7 Sigma70_r4 TPR_21
Other DBs
NCBI-ProteinID: AMP05657
UniProt: A0A127Q6J9
Position
complement(3421657..3422895)
AA seq 412 aa
MQTNASIEDIYRSESRRVFATLVRLLGDFDLAEEALQDAFKAAIEQWPRDGIPAQPVAWL
VSAGRFKAIDGIRRRARFTSYEDVAEVADAIPDETPAPDQREHLEDDRLRLIFTCCHPSL
APDAQIALTLREVCGLSTEEIAHAFLTPAPTLAQRIVRAKAKIRDARIPYQVPERDELPA
RLYSVLRVVYLVFNEGYSASSGVSLTRHDLSQEAIRLARLLLELLPEPEVAGLLALMLLH
ESRRSARSTADGDLVPLDEQDRSLWNAELIAEGSALVGHAVSSRRIGAYTLQAAISAVHA
QAPRADATDWQQIVGLYDALLRLEPTPVIELNRAVAVAMHQGPEAGLVLVDGLIAGGHLH
NYHLAYAAQADFHRRLGHVAEARAAYGKALALTQQEPEQRFLHRRLAGLAEQ
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgcaaacaaacgcttcgattgaagacatttaccgtagcgaatcgcggcgcgtattcgcc
acgctggtgcgcctgctgggcgacttcgacctggcagaagaagccctgcaagatgccttc
aaggccgccatcgagcaatggccgcgcgatggcattccagcgcagccggtagcgtggctg
gtgtccgccgggcgcttcaaggccatcgacggcatccggcggcgcgccaggtttacctcc
tatgaagacgtcgccgaggtggccgacgcgattcctgacgagacgccggcgccggaccag
cgcgagcatctggaggatgaccgcctgcgtttgatttttacctgctgccacccttcgctg
gcgcccgatgctcagatagccttgaccttgcgcgaagtctgcggactcagcacggaagaa
atcgcacacgcctttctgactccggcaccgacgctggcgcaacgtatcgtgcgcgccaag
gccaagatacgcgacgcccgcattccctaccaggtgcctgagcgcgacgaattgccggcg
cggctgtacagcgtgctgcgtgtggtctatctggtgttcaacgagggctattcggcatct
tccggcgtctcgctcacacggcatgacttgtcgcaggaagcgatccgtctggcgcgtctg
ctgctggaattgctgcctgagccggaagtggcgggcctgctggccctgatgttgctgcat
gagtcgcgccgcagtgcgcgcagcaccgcggacggcgacctggtgccgctcgacgagcaa
gaccgcagcttatggaatgccgaactgattgccgaaggttcggcgttggtcgggcatgcc
gtgtcgtcgcgacggataggcgcctatacgctgcaggcggcgatctcggcggtgcatgcg
caagcgccgcgggccgatgctaccgactggcagcagatcgtcggcttgtacgacgccttg
ctgcggctggagccgacgccggtgatcgaattgaaccgcgcggtcgcggtagcgatgcac
caggggcccgaggctggcctggtgttggtggacgggctgattgccggcggtcacttgcat
aactatcatctggcgtatgcggcgcaagccgatttccaccggcgcctgggacatgtggca
gaagcgcgcgctgcctatggcaaggcactggcgctgacgcagcaggagccggagcagcgt
tttctgcaccggcgtctggctggcctggccgaacaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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