KEGG   Corynebacterium pseudotuberculosis 48252: CPTA_01426
Entry
CPTA_01426        CDS       T03482                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cpse  Corynebacterium pseudotuberculosis 48252
Pathway
cpse03030  DNA replication
cpse03410  Base excision repair
cpse03420  Nucleotide excision repair
cpse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPTA_01426
   03410 Base excision repair
    CPTA_01426
   03420 Nucleotide excision repair
    CPTA_01426
   03430 Mismatch repair
    CPTA_01426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpse03032]
    CPTA_01426
   03400 DNA repair and recombination proteins [BR:cpse03400]
    CPTA_01426
Enzymes [BR:cpse01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CPTA_01426
DNA replication proteins [BR:cpse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CPTA_01426
DNA repair and recombination proteins [BR:cpse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CPTA_01426
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CPTA_01426
   MMR (mismatch excision repair)
    DNA ligase
     CPTA_01426
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CPTA_01426
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT BRCT_2
Other DBs
NCBI-ProteinID: AIG07255
UniProt: A0A515DZN4
Position
1476402..1478486
AA seq 694 aa
MVQLPLKLNTNDKLDIVTDSNIELRRQWDELAEQVRYHRDAYYNDTPEISDQDFDALFRT
LQKLEEEHPELAVPDSPTLEVGAPVALSSSFNNVEHLERLMSLDNVFDAAELSEWLQRTP
AQAYLTELKIDGLSLDLIYRDGKLWRAATRGDGRIGEDVTENAKVIADVPHRLKENAEFP
IPELLEVRGEVFIAVEDFAAVNEQRQLEGGKPFANPRNAAAGSLRQKDVEAVKKRRLRMI
CHGLGATQGFTPASQYHAYEALAAWGLPVSPYTELVQSAAEVQEKVLYWAEHRHDAAHEM
DGVVVKVDSISEQRALGATARAPRWAIAYKYPPEEVTTELLDIQVGVGRTGRVTPFAVMR
PVFVAGSTVSMATLHNQTEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVEKRDGTEREFIF
PTLCPSCGTRLAPQKEDDADWRCPNSQSCPAQLSTRLTYLAGRGAFDIEALGEKAAEDLI
RTGVLIDEAGLFELTEEDLLKTRVYTTKKKTLNATGSKLLANLEQSKKADLWRVLVALSI
RHVGPTAARALASRYHSMDALREASAEEIADTEGVGAIIAQSFKDWFEVDWHAHIVEQWA
RAGVTMAEETSQLPEQTLAGMTVVVTGSLEGFSRDSAKEAIISRGGKASTSVSKKTDYVV
VGENAGSKETKARELGLTILDESGFIRLLENGSV
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggtgcaacttccgctgaagttaaataccaacgataaactagatatcgtgactgattcc
aatatcgaactccgcagacaatgggacgaactcgctgaacaagtgcgatatcatcgtgat
gcgtattataacgacacacctgagatcagtgaccaagattttgatgcgttgttccggacg
ctccaaaagcttgaagaggaacaccccgaactcgcagttccagacagccccacgctagaa
gtcggagcccctgtggctttgagctctagttttaataatgtagagcacctggaacgcctc
atgagcttagataatgtgtttgacgccgcagagctttctgagtggttgcaaagaacaccg
gcgcaggcttatctaaccgagttgaagatcgatggactttcactagaccttatttaccgc
gatggaaaattatggcgtgcggctactaggggcgatggcaggatcggtgaagacgtcacc
gaaaacgcaaaagtgattgctgatgtgccgcatcgacttaaggaaaacgcagagtttcct
atccctgaactgctggaggttcgaggtgaagtttttatcgctgtagaagactttgctgcg
gttaatgaacaacgccaattggagggaggaaaaccctttgctaatccgcgcaatgcggct
gccggctcattaagacaaaaagacgttgaagctgttaaaaaacgcaggcttcggatgatc
tgtcatggacttggtgctactcagggttttactcccgcgtcgcagtaccatgcgtatgag
gcattggcagcttggggcctgcctgtttctccttataccgagcttgtccagtcagccgca
gaagtgcaggaaaaggttctatattgggccgagcatcgtcacgacgcagcgcatgagatg
gatggagttgtagttaaggtagacagcatctcagagcagcgagcgttgggggctacagcc
agagctccgcgctgggctatcgcctacaaatacccgccagaagaagttacaacggaactc
ttagacattcaggtaggagtgggcaggaccgggcgtgttactccctttgccgttatgcgt
ccagtctttgtcgccggatctactgtgtctatggctacgctgcacaaccaaacggaagta
aaacgtaaaggagtgctcatcggggacaccgtggtgatccgcaaagcaggtgaggtgatc
ccagaagttcttgggccggtagtggaaaaacgagacgggactgagcgcgagtttattttc
cctactttgtgtcctagctgtggtacccggcttgcgccgcaaaaagaggacgatgcggat
tggcgttgccctaattctcaatcgtgcccggcgcagttgagcacgcgtttaacctatcta
gcaggacgcggcgcttttgatattgaagctttaggagaaaaagcagcggaggatctcatc
cgtacaggggtgcttatcgacgaagccgggttgtttgagcttacagaagaagacctacta
aagactcgcgtgtacacaacaaagaagaagacgctgaatgcgactggctccaagttgtta
gccaacttggagcaatcgaaaaaagctgatctttggcgggtgcttgtcgcgctatctatt
agacacgttggtcccaccgccgcccgggcattagcgtcccgttatcactctatggacgca
ttgcgagaagccagcgcggaagagattgcggatactgaaggcgttggagcgatcatcgca
caaagttttaaagattggtttgaagttgattggcacgcccacatcgtagagcagtgggca
cgtgctggtgtgacgatggccgaagagacctcccaattgccggagcaaacactggcgggt
atgactgttgtggtcactggttctttggaaggctttagtcgcgattctgctaaggaagcc
atcatcagccgtggcggtaaagcctcaacatcggtgtctaaaaaaaccgattatgttgtg
gttggagaaaacgccggttctaaggaaactaaagcaagagaactaggactcaccattctt
gacgagtccggttttatccgactactagaaaacggatcggtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system