KEGG   Corynebacterium pseudotuberculosis Ft_2193/67: CPTC_01498
Entry
CPTC_01498        CDS       T03484                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cpsf  Corynebacterium pseudotuberculosis Ft_2193/67
Pathway
cpsf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpsf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CPTC_01498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpsf03400]
    CPTC_01498
DNA repair and recombination proteins [BR:cpsf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CPTC_01498
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CPTC_01498
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 AAA_16 RsgA_GTPase AAA_23 APS_kinase AAA_33 AAA_25 AAA_22 nSTAND1 nSTAND3 AAA_18 DnaJ_CXXCXGXG Viral_helicase1 NACHT MMR_HSR1 cobW ScfRs SLFN-g3_helicase NTPase_1
Other DBs
NCBI-ProteinID: AIG11786
Position
1545908..1548772
AA seq 954 aa
MADRLVVRGAREHNLKGVNIDIPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDFIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLFARAGTAH
CPVCDAVIERQTPQQIVDQVLAMEEGLKFQVLAPVVRTRKGEFVDLFADLASQGFSRVQV
DGEVYSLTEPPKLKKQIKHDIDVVVDRLQVKPSQRQRLTDSVETALGLADGVVALDFVSL
DSSDPHRVRRFSEKMACPNGHVLSVDELEPRSFSFNSPYGACPDCDGLGTRTVVDVDLLI
PDKDAPVVRCVQPWNSSPNHKYFQKLIEGLAAALGFDPETPFSKLTKAQQNALINGSSDE
VTVRYKNRYGRVRNWTAPFEGVLGYIERKLEQTGSESQKDRLLQYTREDACKTCGGARLR
PEILAVRIRSTSHGELSIAGLSELSVNDAAEFLKSLVLGKREEIIAGAVLKEINARLKFL
LDVGLNYLTLNRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIAT
LERLRDIGNTLIVVEHDEDTIRAADWLIDVGPKAGEYGGQIVYQGKPQGIIECEESITGA
YLSGRKVLGVPDERRSIDPNRKLKVVGARENNLRDIDVEIPLGVLACITGVSGSGKSTLI
NQILAKVLGNELNRSRNVPGRAKRVEGMENLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAETSEAKVRGYKAGRFSFNVKGGRCEACQGDGTLKIEMNFLPDVYVPCEVCQGARY
NRETLEVKYKGKNIAEVLDMPISEAAEFFEPITSIHRYLKTLTEVGLGYVRLGQSATTLS
GGEAQRVKLASELQKRSNGRTIYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVIVIEHN
LDVIKAADWIIDMGPEGGSGGGTVVAEGTPEAVAAVSGSYTGAFLKEVLGKQPA
NT seq 2865 nt   +upstreamnt  +downstreamnt
gtggcagatcgtcttgtagtacgtggtgcacgggaacacaacctaaaaggcgtgaatatt
gatattccgcgcgattctatggtcgtgttcacggggctatcgggatcaggaaaatcatcc
ttagcttttgacacgatttttgccgagggacaacggcgctatgttgagtctttgtcttca
tatgcccgaatgtttttagggcagatggataagccggatgtggatttcatcgatggtctt
tctcctgctgtttctattgatcagaagtccactaaccgtaatccgcgctccacggtgggc
acgattacagagatttatgattatctccgactcttgtttgctcgagctggcactgcgcat
tgtccggtctgtgatgcagtaattgagcgtcagactccacagcagatcgtcgaccaggta
ttagcaatggaagagggattaaagttccaggttctggctcctgtagtacgcactcgcaaa
ggtgaattcgttgatcttttcgcggacttagcttctcaaggtttctcacgagtgcaggtt
gatggcgaggtatattctttaacagagcctcctaagctgaagaaacaaatcaagcatgat
attgacgtggttgtggatagacttcaggtgaagccatcgcagcgacagcgtttaacagac
tctgtagagacagcattgggattagccgatggggttgttgctttggattttgtgtcctta
gattcctctgatccacatcgagttcgtcgtttctcggagaaaatggcgtgtcctaatggc
cacgtattaagtgtggatgagcttgaaccgcgttctttctcttttaattctccttatggt
gcgtgccctgattgcgatggtttaggaacccgaacggtagtagacgtcgatcttctgatt
ccagataaagacgctcccgtggtgcgctgcgttcagccttggaactcgagcccaaatcat
aaatattttcaaaaacttattgaaggacttgctgcggccctggggtttgatcccgaaact
cctttcagcaagttaaccaaagctcaacaaaatgcacttattaacggtagctctgatgag
gtgactgtacgttataaaaaccgttatggccgagtgcgaaattggacagcgccttttgaa
ggcgttttggggtatatcgagagaaagttagagcaaaccggttctgaatctcagaaggat
cggctacttcagtacacccgcgaagatgcatgtaaaacatgtggcggcgctcgcttgcgt
ccggagatcttagctgttcgtatcaggtctacctctcatggtgagctttctatcgcagga
ttgagtgagctttccgttaatgatgcggctgaattcttaaagtccttggtgctgggtaag
cgtgaagagattattgccggagctgtactgaaggaaattaatgctaggttgaaattcttg
ctagatgttgggctgaactacctcactctaaaccggagcgcaggcacattgtctggaggg
gaagcccagcgtattcgtttagctacacagattggttccgggctggctggagttctctat
gttctcgatgaaccctcgattggactgcatcaacgagataaccagcgtttgattgctacg
ctcgagcggcttcgcgatattggtaataccctcatcgttgtagagcatgatgaggacact
atccgtgcagcagattggcttatcgacgtagggccaaaggccggtgagtacggtggacaa
attgtttaccagggcaagcctcagggaatcattgagtgcgaggaatccatcactggtgcc
tatctttctggtcgaaaagtcctcggagtgccggatgaacgccgaagcattgatccaaac
cgcaagctcaaagttgtgggggcgcgagaaaacaatctgagagatattgatgttgaaata
cctttgggagtacttgcctgtattacgggagtatcgggctcgggtaaatcaacgttaatc
aatcagattcttgcaaaggtcttaggcaatgagctgaatagatcacgaaatgtcccgggg
agggcaaaacgcgttgaagggatggagaacctagataaattagtgcaggttgatcaatct
cccatcgggcgcacgcctcgttccaatcccgcaacgtatacaggggtctttgataaaatt
agaaccttgttcgcggagacctctgaagccaaagttcgaggctataaagccggccgtttc
tctttcaacgttaaaggcgggaggtgcgaagcgtgccagggcgacggaactttgaagatt
gagatgaatttcttgcctgatgtctatgttccgtgtgaggtttgtcagggcgctcgctac
aatcgtgagactttggaagttaagtacaagggaaaaaatatcgccgaagtccttgatatg
ccgataagtgaggctgctgaattctttgagccaatcacctcgattcaccgttaccttaaa
actttgacagaagtgggtttggggtacgtcagattagggcagtcagcgaccacactttct
ggaggtgaagcacaacgcgtaaaacttgcctcagagttgcagaaacgctccaacgggaga
actatttatattttggatgagccgacaacaggacttcattttgaagatattagaaagctc
atgcttgttatccagggattagtggataaaggaaattcggtcatagtaatcgagcataat
ttggatgtaataaaggctgctgactggattatcgatatgggcccagaaggagggtctggt
ggaggtactgtggttgcagaaggaacgccggaagccgttgcggccgtttcaggttcttac
actggagcttttttaaaggaagtcttaggtaaacagccggcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (31)   

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