KEGG   Coniophora puteana: CONPUDRAFT_122503
Entry
CONPUDRAFT_122503 CDS       T03134                                 
Name
(RefSeq) histone deacetylase RPD3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cput  Coniophora puteana
Pathway
cput03082  ATP-dependent chromatin remodeling
cput03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CONPUDRAFT_122503
   03083 Polycomb repressive complex
    CONPUDRAFT_122503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cput03036]
    CONPUDRAFT_122503
Enzymes [BR:cput01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CONPUDRAFT_122503
Chromosome and associated proteins [BR:cput03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CONPUDRAFT_122503
   HDAC complexes
    Sin3A-HDAC complex
     CONPUDRAFT_122503
    BRAF-HDAC complex
     CONPUDRAFT_122503
    REST complex
     CONPUDRAFT_122503
    SHIP complex
     CONPUDRAFT_122503
    MiDAC complex
     CONPUDRAFT_122503
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CONPUDRAFT_122503
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CONPUDRAFT_122503
  Chromatin remodeling factors
   NuRD complex
    CONPUDRAFT_122503
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 19199700
NCBI-ProteinID: XP_007767851
JGI: Conpu1_122503
UniProt: A0A5M3MSG7
Position
Unknown
AA seq 528 aa
MSKKRISYYYDPEVGSYTYGLGHLMKPHRIRMAHELITAYGMLEKMSVLRAKRASAESMT
AFHTDEYIHFLSRVTPETADELTYNGTRFLLGDDNPPFDGVFEYSSISAGGSLAAARRIQ
DGAADIAINWAGGLHHAKKREASGFCYINDIVLCILELLRTYARVLYIDVDCHHGDGVEE
AFYTTDRVMTCSLHKFGEFFPGTGTLDDKGYGKGKGYSVNVPLKDGIRDDSYKSVFEPVI
GKILEVFRPSAVVLQLGADSLAGDKLGCFNLTMHGHANCVTFLRNAGLPLVLLGGGGYTT
KNVARAWTYETGVALNMEQELDDNLPWCSHFEWYGPRYKLEVQANNMDDINVKDGSLDRV
RISALQQLSELGSRNAPSVGMHDVPRQSVGSHLGLGDYDVDVESDGDMDDLDRKLAQHAR
YVYRLQESDANQNSDESDEDSDTSYSSRRKRMSILTNRYFDASAERDPCGQNPSRRKFFK
SRAHWDPTFGQVTVNDRSLFATDKSLSTTMENGGSTSGYADAMDEDQD
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgtccaagaagagaatatcctactactatgaccccgaagtcgggtcatatacctacggc
cttggccatctcatgaaaccacatcggatacgcatggcccatgagctcataaccgcctat
ggcatgctcgaaaagatgagcgtattgcgtgcaaaacgcgcttctgcagagtccatgacc
gcctttcacaccgacgagtacatccacttcctcagcagagtcaccccggaaaccgcggac
gagctcacctataacgggacaagattcctccttggggatgataatccaccgtttgatgga
gtcttcgaatacagctctatatctgctggaggctcactagccgctgcgagacggatacag
gacggtgctgcagatatcgccataaattgggcaggtggtcttcaccatgccaagaagcga
gaggcatccggcttctgttacatcaacgacattgtgctctgcatcctcgagctgctgagg
acgtacgcccgcgtgctgtacatcgacgtcgactgccaccacggggatggcgtggaagag
gcgttttacaccacggatagggtgatgacctgctcgctgcacaagtttggagagttcttc
cccgggacaggtacgctggacgacaaggggtatggtaaaggaaagggttactcagtgaat
gtgcctctgaaggatggtatacgggatgattcgtacaagagcgtgtttgagccggtcata
ggcaaaatcctggaagtcttcagaccatccgcggttgtcttgcaattaggcgcggattcg
ctcgcgggcgacaagctcggatgctttaacctcactatgcacggtcacgcgaattgcgtc
accttcctacgcaacgcgggcctgccgctcgttctgctcggcgggggcgggtacacgacg
aaaaacgtggcgcgcgcgtggacgtacgagacgggcgtcgcgctgaacatggagcaggag
ctggacgacaatctgccgtggtgctcgcactttgagtggtacggcccgcggtacaagctc
gaggtgcaggcgaacaatatggacgatatcaacgtcaaggatggctcgctcgaccgggtg
aggatatcggcgctgcagcagctgagcgagctagggtcgaggaacgcgccgtcggttggg
atgcatgacgtgccgagacagagcgtcgggagtcatctgggcttgggtgactacgatgtg
gatgtcgagtcggacggtgatatggacgacttggacaggaagttggcgcagcatgcgcgg
tacgtgtacaggctacaagagtcggacgcgaaccagaactcggacgagtcggacgaggac
tcggacacatcttacagctcgcggcggaaacgcatgagcatcctgactaaccggtacttt
gacgcgagtgctgaacgggacccatgtgggcaaaacccgtcgcggcgcaagttcttcaag
agtcgggcacactgggaccccactttcgggcaggtgactgtgaacgaccggtcattgttt
gcgacagacaagtcgttgtcaactacgatggagaatggaggatcgacgtcgggctatgcg
gatgccatggacgaggatcaggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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